RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 WIPI2Q9Y4P8 454 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 OTOGLQ3ZCN5 2332 aa9.89□□□□□ -0.83
SOX9-201ENST00000245479 SYNGR1O43759 233 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 NDUFB4O95168 129 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 SRSF6Q13247 344 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 ATP6V1FQ16864 119 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 OR5B3Q8NH48 314 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 TMEM147Q9BVK8 224 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 BOKQ9UMX3 212 aaPredicted RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 IGLV3-19P01714 112 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 SRP14P37108 136 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 NUBP1P53384 320 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 TMEM211Q6ICI0 200 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 ZNF441Q8N8Z8 693 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 OR4B1Q8NGF8 309 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 OR4C12Q96R67 309 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 MRPL13Q9BYD1 178 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 PILRBQ9UKJ0 227 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 KLF7O75840 302 aaPredicted RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 HGFACQ04756 655 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 LHFPL1Q86WI0 220 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 WDR61Q9GZS3 305 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 UQCR10Q9UDW1 63 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 CEACAM1P13688 526 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 SLC35B1P78383 322 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 UNQ6494/PRO21346Q6UXR6 183 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 CYP2G1PQ6ZSU1 146 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 OR5D13Q8NGL4 314 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
SOX9-201ENST00000245479 CORO2AQ92828 525 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
SOX9-201ENST00000245479 DOPEY2Q9Y3R5 2298 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 GCH1P30793 250 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 PTGDSP41222 190 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 PRDX4Q13162 271 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 PRR27Q6MZM9 219 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 MRPL54Q6P161 138 aaKnown RBP9.87□□□□□ -0.83
SOX9-201ENST00000245479 ZNF826PQ6ZT77 177 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 DAZAP1Q96EP5 407 aaKnown RBP9.87□□□□□ -0.83
SOX9-201ENST00000245479 COL12A1Q99715 3063 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 ANKRD11Q6UB99 2663 aaPredicted RBP9.87□□□□□ -0.83
SOX9-201ENST00000245479 SPAARA0A1B0GVQ0 90 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 CDIPTO14735 213 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 ACTL6BO94805 426 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 COX5BP10606 129 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 CD99P14209 185 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 RAC3P60763 192 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 ZDHHC23Q8IYP9 409 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 SELENOHQ8IZQ5 122 aaKnown RBP9.87□□□□□ -0.83
SOX9-201ENST00000245479 Q96M66 194 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 TRIB1Q96RU8 372 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 CDH20Q9HBT6 801 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 PPIHO43447 177 aaKnown RBP9.87□□□□□ -0.83
SOX9-201ENST00000245479 F2RP25116 425 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 BRS3P32247 399 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 ATOH7Q8N100 152 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 TAF15Q92804 592 aaKnown RBP eCLIP9.87□□□□□ -0.83
SOX9-201ENST00000245479 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
SOX9-201ENST00000245479 LYL1P12980 280 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 RAB35Q15286 201 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 RPEL1Q2QD12 228 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 MAJINQ3KP22 176 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 Q56UQ5 140 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 TGIF2LYQ8IUE0 185 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 MIEN1Q9BRT3 115 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.86□□□□□ -0.83
SOX9-201ENST00000245479 K7ERU9 68 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 CD33P20138 364 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 FKBP2P26885 142 aaKnown RBP9.86□□□□□ -0.83
SOX9-201ENST00000245479 IL11RAQ14626 422 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 TMEM170AQ8WVE7 144 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 CBLN1P23435 193 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 KIAA1644Q3SXP7 199 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 CARFQ8N187 725 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 CPEB3Q8NE35 698 aaKnown RBP9.86□□□□□ -0.83
SOX9-201ENST00000245479 NANOS1Q8WY41 292 aaKnown RBP9.86□□□□□ -0.83
SOX9-201ENST00000245479 GPR146Q96CH1 333 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 OR6C3Q9NZP0 311 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 WASHC3Q9Y3C0 194 aa9.86□□□□□ -0.83
SOX9-201ENST00000245479 ZP4Q12836 540 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 C17orf82Q86X59 251 aaPredicted RBP9.85□□□□□ -0.83
SOX9-201ENST00000245479 OR2H1Q9GZK4 316 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 GPR35Q9HC97 309 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 TMEM38BQ9NVV0 291 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 IGKV1-27A0A075B6S5 117 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 PDE6DO43924 150 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 IFI6P09912 130 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 IRF2P14316 349 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 CEACAM6P40199 344 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
SOX9-201ENST00000245479 OR8B8Q15620 311 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 FAM53AQ6NSI3 398 aaPredicted RBP9.85□□□□□ -0.83
SOX9-201ENST00000245479 SLC35E1Q96K37 410 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 IMMP2LQ96T52 175 aa9.85□□□□□ -0.83
SOX9-201ENST00000245479 MRPL18Q9H0U6 180 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms