RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PRO1933Q9H354 126 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 LOC390937A0A1W2PQ73 354 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 MPDU1O75352 247 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 CFDP00746 253 aaPredicted RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 SLC16A13Q7RTY0 426 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 LDLRAD3Q86YD5 345 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 ZDHHC8Q9ULC8 765 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 UFC1Q9Y3C8 167 aa9.88□□□□□ -0.83
NOD1-201ENST00000222823 ZNF106Q9H2Y7 1883 aaKnown RBP9.88□□□□□ -0.83
NOD1-201ENST00000222823 RALGAPA1Q6GYQ0 2036 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 TRAV20A0A0B4J274 112 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 J3QR89 54 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 OR10J1P30954 320 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 ECSCRQ19T08 205 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 DPPA3Q6W0C5 159 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 CYB561D1Q8N8Q1 229 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 LYRM2Q9NU23 88 aaPredicted RBP9.87□□□□□ -0.83
NOD1-201ENST00000222823 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 TRAV34A0A0B4J273 112 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 BMPR1BO00238 502 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 F12P00748 615 aaPredicted RBP9.87□□□□□ -0.83
NOD1-201ENST00000222823 MUC1P15941 1255 aaPredicted RBP9.87□□□□□ -0.83
NOD1-201ENST00000222823 HOXA6P31267 233 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 MEOX2P50222 304 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 ZP1P60852 638 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 HLA-DRB5Q30154 266 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 GPR146Q96CH1 333 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 CALYQ9NYX4 217 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 FOXJ2Q9P0K8 574 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 HYPMO75409 117 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 FAM209AQ5JX71 171 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 ZNF645Q8N7E2 425 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 WDR31Q8NA23 367 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 FDCSPQ8NFU4 85 aa9.87□□□□□ -0.83
NOD1-201ENST00000222823 ELOA3CA0A087WX78 387 aaPredicted RBP9.86□□□□□ -0.83
NOD1-201ENST00000222823 SNRPCP09234 159 aaKnown RBP9.86□□□□□ -0.83
NOD1-201ENST00000222823 HIST1H1EP10412 219 aaKnown RBP9.86□□□□□ -0.83
NOD1-201ENST00000222823 RNF151Q2KHN1 245 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 HILPDAQ9Y5L2 63 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 PRSS1P07477 247 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 RPL8P62917 257 aaKnown RBP9.86□□□□□ -0.83
NOD1-201ENST00000222823 SGMS2Q8NHU3 365 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 SLC2A8Q9NY64 477 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 KCNMB2Q9Y691 235 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 TTC28Q96AY4 2481 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 PLXND1Q9Y4D7 1925 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 SNURFLB1AK76 121 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 NDUFA2O43678 99 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 CD74P04233 296 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 PTGDSP41222 190 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 SELENOTP62341 195 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 RIGQ13278 110 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 LRP11Q86VZ4 500 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 AQP10Q96PS8 301 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 OR4C12Q96R67 309 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 PAXXQ9BUH6 204 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 CEACAM18A8MTB9 384 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 IER3P46695 156 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 MMD2Q8IY49 270 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 TAF15Q92804 592 aaKnown RBP eCLIP9.86□□□□□ -0.83
NOD1-201ENST00000222823 STARD4Q96DR4 205 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 SIGLEC12Q96PQ1 595 aa9.86□□□□□ -0.83
NOD1-201ENST00000222823 HELZP42694 1942 aaKnown RBP9.85□□□□□ -0.83
NOD1-201ENST00000222823 IGKV1D-43A0A0B4J1Z2 117 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 SMPD2O60906 423 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 ZNF883P0CG24 379 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 KCNMB1Q16558 191 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 Q6ZT83 130 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 SHISA5Q8N114 240 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 OR2D3Q8NGH3 330 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 TMEM54Q969K7 222 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 LINC00470Q9BZP3 86 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 J3QW42 95 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 M0R2Z0 102 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 GLIPR1P48060 266 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 MEF2BQ02080 365 aaPredicted RBP9.85□□□□□ -0.83
NOD1-201ENST00000222823 GUCA2BQ16661 112 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 HCP5Q6MZN7 132 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 FAM216AQ8WUB2 273 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 VPS25Q9BRG1 176 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 TMEM204Q9BSN7 226 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 FAM90A26D6RGX4 464 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 J3KRW8 73 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 LINC00869P0C866 280 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 HKR1P10072 659 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 Q1RN00 199 aa9.85□□□□□ -0.83
NOD1-201ENST00000222823 CELA3AP09093 270 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 HSPE1P61604 102 aaKnown RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 LHFPL5Q8TAF8 219 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 TMEM191AQ9H0A3 160 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 ZNF552Q9H707 407 aaPredicted RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 ZNF703Q9H7S9 590 aaPredicted RBP9.84□□□□□ -0.83
NOD1-201ENST00000222823 GP6Q9HCN6 339 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 RABAC1Q9UI14 185 aa9.84□□□□□ -0.83
NOD1-201ENST00000222823 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms