RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IGHV2-70P01814 119 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BJP06899 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BOP23527 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BBP33778 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 FGF8P55075 233 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 NDUFA6P56556 154 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BDP58876 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BCP62807 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 COL10A1Q03692 680 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 CATR1Q13166 79 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST2H2BEQ16778 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 TRAT1Q6PIZ9 186 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 ZNF474Q6S9Z5 364 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 CENPVQ7Z7K6 275 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 TAF15Q92804 592 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BHQ93079 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 LURAP1Q96LR2 239 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BNQ99877 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HIST1H2BMQ99879 126 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 GGACTQ9BVM4 153 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 OR2D2Q9H210 308 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 TIMM9Q9Y5J7 89 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 PRR14LQ5THK1 2151 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 CYB5R3P00387 301 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-201ENST00000221922 P0C879 139 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 PAX5Q02548 391 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 TNFRSF9Q07011 255 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 C3orf36Q3SXR2 165 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 RPRMLQ8N4K4 120 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 HSPB7Q9UBY9 170 aa18.54■□□□□ 0.56
CCDC9-201ENST00000221922 SLC38A11Q08AI6 406 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 TCTEX1D1Q8N7M0 179 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 FAM57AQ8TBR7 257 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 LRRC29Q8WV35 223 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 SFXN3Q9BWM7 321 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 SSUH2Q9Y2M2 353 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 MAP1LC3B2A6NCE7 125 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 CLDN34H7C241 214 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 EIF4EBP1Q13541 118 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-201ENST00000221922 OR52L2PQ8NGH6 319 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 MRGPRDQ8TDS7 321 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 EDARADDQ8WWZ3 215 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 MAP1LC3BQ9GZQ8 125 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 RBKSQ9H477 322 aa18.53■□□□□ 0.56
CCDC9-201ENST00000221922 CHD3Q12873 2000 aaKnown RBP18.52■□□□□ 0.56
CCDC9-201ENST00000221922 SVILO95425 2214 aa18.52■□□□□ 0.56
CCDC9-201ENST00000221922 IFNA1P01562 189 aa18.52■□□□□ 0.56
CCDC9-201ENST00000221922 CEACAM8P31997 349 aaPredicted RBP18.52■□□□□ 0.56
CCDC9-201ENST00000221922 FAM180AQ6UWF9 173 aa18.52■□□□□ 0.56
CCDC9-201ENST00000221922 S100PBPQ96BU1 408 aa18.52■□□□□ 0.56
CCDC9-201ENST00000221922 TRGC2P03986 189 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 FAM90A1Q86YD7 464 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 C1orf87Q8N0U7 546 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 OR2Z1Q8NG97 314 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 FAM210BQ96KR6 192 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 GAR1Q9NY12 217 aaKnown RBP18.51■□□□□ 0.55
CCDC9-201ENST00000221922 TGOLN2O43493 480 aa18.51■□□□□ 0.55
CCDC9-201ENST00000221922 SPENQ96T58 3664 aaKnown RBP18.51■□□□□ 0.55
CCDC9-201ENST00000221922 UBE2L5PA0A1B0GUS4 154 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 CEBPZOSA8MTT3 80 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 SEC14L6B5MCN3 397 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 RAMP3O60896 148 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 WDR25Q64LD2 544 aaPredicted RBP18.5■□□□□ 0.55
CCDC9-201ENST00000221922 SPNS3Q6ZMD2 512 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 RPP25LQ8N5L8 163 aaKnown RBP18.5■□□□□ 0.55
CCDC9-201ENST00000221922 AGMATQ9BSE5 352 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 METRNQ9UJH8 293 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 SPINT2O43291 252 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 CLDN1O95832 211 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 PRDX2P32119 198 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 ZNF83P51522 516 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 ELLP55199 621 aaPredicted RBP18.5■□□□□ 0.55
CCDC9-201ENST00000221922 C5orf30Q96GV9 206 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 CTDSP1Q9GZU7 261 aa18.5■□□□□ 0.55
CCDC9-201ENST00000221922 TRBV24-1A0A075B6N3 115 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 SRRM5B3KS81 715 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 DLL1O00548 723 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 ZNF737O75373 536 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 IGKV1D-33P01593 117 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 IGKV1-33P01594 117 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 ADH4P08319 380 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 S100A2P29034 98 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 CFHR2P36980 270 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 HTD2P86397 168 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 HOXA4Q00056 320 aaPredicted RBP18.49■□□□□ 0.55
CCDC9-201ENST00000221922 CACNA1DQ01668 2161 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 ATP6V1FQ16864 119 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 OR8G2PQ6IF36 304 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 ZNF808Q8N4W9 903 aaPredicted RBP18.49■□□□□ 0.55
CCDC9-201ENST00000221922 CD177Q8N6Q3 437 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 OR13A1Q8NGR1 328 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 PPP1R35Q8TAP8 253 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 SLC39A9Q9NUM3 307 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 LAMP3Q9UQV4 416 aa18.49■□□□□ 0.55
CCDC9-201ENST00000221922 ELOA3CA0A087WX78 387 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-201ENST00000221922 M0R1B8 84 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 CRYAAP02489 173 aa18.48■□□□□ 0.55
CCDC9-201ENST00000221922 RPL30P62888 115 aaKnown RBP18.48■□□□□ 0.55
CCDC9-201ENST00000221922 PYY3Q5JQD4 70 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms