RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 EGR1P18146 543 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 TMEM41BQ5BJD5 291 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 UTF1Q5T230 341 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 NCR3LG1Q68D85 454 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 ZNRF1Q8ND25 227 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
CNOT3-201ENST00000221232 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
CNOT3-201ENST00000221232 IGKV3-15P01624 115 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 EDDM3BP56851 147 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 ADIRFQ15847 76 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 ZNF718Q3SXZ3 478 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 HES4Q9HCC6 221 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 DOK5Q9P104 306 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 GNG12Q9UBI6 72 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
CNOT3-201ENST00000221232 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 FCGR3BO75015 233 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 COL8A2P25067 703 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 MSMO1Q15800 293 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 RPRMLQ8N4K4 120 aa12.21□□□□□ -0.45
CNOT3-201ENST00000221232 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
CNOT3-201ENST00000221232 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 SMCO3A2RU48 225 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 SOX15O60248 233 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 FABP1P07148 127 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 TUBG1P23258 451 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 PRDX2P32119 198 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 EIF2S3P41091 472 aaKnown RBP12.2□□□□□ -0.46
CNOT3-201ENST00000221232 CATR1Q13166 79 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 FFAR4Q5NUL3 377 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 OR10P1Q8NGE3 313 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
CNOT3-201ENST00000221232 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
CNOT3-201ENST00000221232 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 IGHV2OR16-5A0A0B4J2B6 119 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 GCSAMLQ5JQS6 135 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 WDR25Q64LD2 544 aaPredicted RBP12.2□□□□□ -0.46
CNOT3-201ENST00000221232 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 OR10G4Q8NGN3 311 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 OR10G9Q8NGN4 311 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 OR10G7Q8NGN6 311 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 HSPB7Q9UBY9 170 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 SPRY3O43610 288 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 SERF2P84101 59 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 TAAR6Q96RI8 345 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
CNOT3-201ENST00000221232 TRAV1-1A0A0B4J248 108 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 M0R1B8 84 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 IGHG3P01860 377 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 S100A8P05109 93 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 DEFB108BQ8NET1 73 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 MALSU1Q96EH3 234 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 SMIM7Q9BQ49 75 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 PSMG3Q9BT73 122 aaPredicted RBP12.19□□□□□ -0.46
CNOT3-201ENST00000221232 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 CD81P60033 236 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 RTP5Q14D33 572 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 SMIM21Q3B7S5 101 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 CDPF1Q6NVV7 123 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 OR4F5Q8NH21 305 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 SDSLQ96GA7 329 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 FAM210BQ96KR6 192 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 OR4F4Q96R69 305 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
CNOT3-201ENST00000221232 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
CNOT3-201ENST00000221232 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 J3QW42 95 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 PPIHO43447 177 aaKnown RBP12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BKO60814 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 PROP1O75360 226 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BJP06899 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 GPR12P47775 334 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
CNOT3-201ENST00000221232 MRGPRGQ86SM5 289 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 SARAFQ96BY9 339 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 STARD4Q96DR4 205 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 RBM14Q96PK6 669 aaKnown RBP12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 PARD6AQ9NPB6 346 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 M0R1X1 148 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 SPINT2O43291 252 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 UBE2G2P60604 165 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms