RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 TGFAP01135 160 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 HOXC8P31273 242 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 RND2P52198 227 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 LAIR2Q6ISS4 152 aa11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 DUSP15Q9H1R2 295 aaPredicted RBP11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 BEX4Q9NWD9 120 aaPredicted RBP11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
TGFBR3-201ENST00000212355 IGLV1-36A0A0B4J1U3 117 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 C7orf71A4D174 169 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 PROB1E7EW31 1015 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 MTCL1Q9Y4B5 1905 aaKnown RBP11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 IGKV1D-43A0A0B4J1Z2 117 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNF98A6NK75 572 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 EIF4EBP2Q13542 120 aaPredicted RBP11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 STXBP6Q8NFX7 210 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 SHISA3A0PJX4 238 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 KLF4O43474 513 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 KBTBD11O94819 623 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 PARLQ9H300 379 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 RECKO95980 971 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 CD99P14209 185 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 AQP3Q92482 292 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 FOXJ2Q9P0K8 574 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 HPRT1P00492 218 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 HERVK_113P61574 105 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 PLAURQ03405 335 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
TGFBR3-201ENST00000212355 TMEM210A6NLX4 147 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CDS2O95674 445 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 THY1P04216 161 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CKS2P33552 79 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 LINC01560Q8TB33 94 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 RND3P61587 244 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 ATG101Q9BSB4 218 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 IL19Q9UHD0 177 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CDK2AP1O14519 115 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 NUDT3O95989 172 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 COTL1Q14019 142 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 TMEM177Q53S58 311 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 C10orf35Q96D05 121 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 G6PC2Q9NQR9 355 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 HSPB7Q9UBY9 170 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 A0A0G2JMM0 328 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 A0A1W2PPB8 328 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 A0A1W2PRS3 328 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 KIR3DP1A8MWS1 328 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 FAM27BQ5VT28 67 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 RRHO14718 337 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 SMIM6P0DI80 62 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 PRSS8Q16651 343 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNF362Q5T0B9 420 aaPredicted RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 GPR132Q9UNW8 380 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 TRBV5-5A0A0J9YX44 114 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 C21orf140B9A014 251 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 SRIP30626 198 aa11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CLPPQ16740 277 aaPredicted RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 SRSF12Q8WXF0 261 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 CISD1Q9NZ45 108 aaKnown RBP11.67□□□□□ -0.54
TGFBR3-201ENST00000212355 A0A1B0GV90 55 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 PRF1P14222 555 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 SLC25A47Q6Q0C1 308 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 IMMP2LQ96T52 175 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 ZNF345Q14585 488 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 DEFB104AQ8WTQ1 72 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 TAF15Q92804 592 aaKnown RBP eCLIP11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 H0Y980 276 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 SIAH2O43255 324 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 RPL27AP46776 148 aaKnown RBP11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 FTH1P19P0C7X4 201 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 AREGP15514 252 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 UNQ5815/PRO19632Q6UWF5 114 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 BIVMQ86UB2 503 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
TGFBR3-201ENST00000212355 OR4A5Q8NH83 315 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms