RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 AMELYQ99218 206 aa9.03□□□□□ -0.96
VCL-201ENST00000211998 A0A1W2PPE3 182 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 GOSR1O95249 250 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 BGLAPP02818 100 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 TEX29Q8N6K0 151 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 CLDND2Q8NHS1 167 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 SPSB4Q96A44 273 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 CHRNA10Q9GZZ6 450 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 TCFL5Q9UL49 500 aa9.02□□□□□ -0.96
VCL-201ENST00000211998 TNFSF13O75888 250 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 ASAH2BP0C7U1 165 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 MRPS11P82912 194 aaKnown RBP9.02□□□□□ -0.97
VCL-201ENST00000211998 RCC1LQ96I51 464 aaKnown RBP9.02□□□□□ -0.97
VCL-201ENST00000211998 SSBP3Q9BWW4 388 aaPredicted RBP9.02□□□□□ -0.97
VCL-201ENST00000211998 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 A0A0G2JK05 382 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 K7ESF4 209 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 KLF4O43474 513 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 CD3EP07766 207 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 SPRED2Q7Z698 418 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
VCL-201ENST00000211998 RELQ04864 619 aaPredicted RBP9.02□□□□□ -0.97
VCL-201ENST00000211998 C1orf194Q5T5A4 169 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 TPTE2P1Q5T6R2 138 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 C1QL4Q86Z23 238 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 GPHA2Q96T91 129 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 SCN9AQ15858 1988 aa9.02□□□□□ -0.97
VCL-201ENST00000211998 BHLHA15Q7RTS1 189 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 TMEM189A5PLL7 270 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 CXCL1P09341 107 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 RBM11P57052 281 aaKnown RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 HOXA4Q00056 320 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 DGAT2L7PQ6IED9 249 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 RASL10BQ96S79 203 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 ASCC3Q8N3C0 2202 aaKnown RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 MS4A18H0YCH9 400 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 LYZL6O75951 148 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 NUBP1P53384 320 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 MS4A18Q3C1V0 323 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 TMEM177Q53S58 311 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 ZNF324BQ6AW86 544 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 VSTM2AQ8TAG5 236 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 APOBEC4Q8WW27 367 aaKnown RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 VCX2Q9H322 139 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 ADMP35318 185 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 VSTM2LQ96N03 204 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 FAM60AQ9NP50 221 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 BEX4Q9NWD9 120 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 ZNF257Q9Y2Q1 563 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 PGLYRP1O75594 196 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 IL9P15248 144 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 UNQ5815/PRO19632Q6UWF5 114 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
VCL-201ENST00000211998 PSMG3Q9BT73 122 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 DUSP15Q9H1R2 295 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 FOXD3Q9UJU5 478 aaPredicted RBP9.01□□□□□ -0.97
VCL-201ENST00000211998 LIPT2A6NK58 231 aa9□□□□□ -0.97
VCL-201ENST00000211998 SCTP09683 121 aa9□□□□□ -0.97
VCL-201ENST00000211998 TNXAQ16473 311 aa9□□□□□ -0.97
VCL-201ENST00000211998 CCL17Q92583 94 aa9□□□□□ -0.97
VCL-201ENST00000211998 MARS2Q96GW9 593 aaKnown RBP9□□□□□ -0.97
VCL-201ENST00000211998 ZNF414Q96IQ9 312 aa9□□□□□ -0.97
VCL-201ENST00000211998 RNF122Q9H9V4 155 aa9□□□□□ -0.97
VCL-201ENST00000211998 KIAA0100Q14667 2235 aaKnown RBP9□□□□□ -0.97
VCL-201ENST00000211998 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
VCL-201ENST00000211998 TRAV8-6A0A0B4J262 113 aa9□□□□□ -0.97
VCL-201ENST00000211998 EREGO14944 169 aa9□□□□□ -0.97
VCL-201ENST00000211998 ZNF324O75467 553 aaPredicted RBP9□□□□□ -0.97
VCL-201ENST00000211998 ERGP11308 486 aa9□□□□□ -0.97
VCL-201ENST00000211998 SOX8P57073 446 aa9□□□□□ -0.97
VCL-201ENST00000211998 UBE2V1Q13404 147 aa9□□□□□ -0.97
VCL-201ENST00000211998 ICAM4Q14773 271 aa9□□□□□ -0.97
VCL-201ENST00000211998 TTC9CQ8N5M4 171 aa9□□□□□ -0.97
VCL-201ENST00000211998 RTN4RQ9BZR6 473 aa9□□□□□ -0.97
VCL-201ENST00000211998 LPAR2Q9HBW0 351 aa9□□□□□ -0.97
VCL-201ENST00000211998 CDK5RAP2Q96SN8 1893 aa9□□□□□ -0.97
VCL-201ENST00000211998 F8VVB4 439 aa9□□□□□ -0.97
VCL-201ENST00000211998 F8VWA3 439 aa9□□□□□ -0.97
VCL-201ENST00000211998 TDGF1P3P51864 188 aa9□□□□□ -0.97
VCL-201ENST00000211998 CENPWQ5EE01 88 aa9□□□□□ -0.97
VCL-201ENST00000211998 C16orf47Q6ZP98 133 aaPredicted RBP9□□□□□ -0.97
VCL-201ENST00000211998 RNF126Q9BV68 326 aa9□□□□□ -0.97
VCL-201ENST00000211998 MAP1LC3AQ9H492 121 aa9□□□□□ -0.97
VCL-201ENST00000211998 FZR1Q9UM11 496 aa9□□□□□ -0.97
VCL-201ENST00000211998 LAMB2P55268 1798 aa9□□□□□ -0.97
VCL-201ENST00000211998 CD160O95971 181 aa9□□□□□ -0.97
VCL-201ENST00000211998 FAM222BQ8WU58 562 aa9□□□□□ -0.97
VCL-201ENST00000211998 PCM1Q15154 2024 aa9□□□□□ -0.97
VCL-201ENST00000211998 RPL23P62829 140 aaKnown RBP8.99□□□□□ -0.97
VCL-201ENST00000211998 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 A0A1B0GTI1 187 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 J3QR06 171 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 TSPAN2O60636 221 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 KRTCAP3Q53RY4 240 aa8.99□□□□□ -0.97
VCL-201ENST00000211998 LY6G6FQ5SQ64 297 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms