RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Ptpn13Q64512 2453 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Trav15d-1-dv6d-1A0A075B624 124 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm5916G5E8W5 102 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 A630023A22RikJ3QP60 199 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r127K7N6J5 305 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dbil5O09035 87 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 P01881 257 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Itgb2P11835 771 aaKnown RBP7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Pcgf2P23798 342 aaKnown RBP7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 LtbP41155 306 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Timm8bP62077 83 aaKnown RBP7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Hist1h3aP68433 136 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 H2-DMb2Q31099 261 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Isg20l2Q3U1G5 368 aaKnown RBP7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 C1rlQ3UZ09 482 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ceacam10Q61400 265 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Tob1Q61471 362 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Gm5771Q792Y9 245 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Ovch2Q7M761 609 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Lrrc75aQ7TSF4 339 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Zar1Q80SU3 361 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Vmn1r225Q8R2A5 298 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr279Q8VFD8 310 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr52Q8VFL0 319 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Olfr641Q8VGX6 312 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 GhsrQ99P50 364 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Dmrtc1c1Q9D410 238 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Atoh7Q9Z2E5 149 aa7.77□□□□□ -1.16
Col28a1-201ENSMUST00000115537 Col6a4A2AX52 2309 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Plxnb1Q8CJH3 2119 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tcrg-V4A0A0B4J1J8 138 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm20489A2AGH5 449 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm4175D3YTW8 314 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr556E9Q549 324 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r7E9Q8T0 311 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r114L7N226 321 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r126L7N2C8 321 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P01629 112 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P01661 131 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P01662 111 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 P01663 111 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mas1P30554 324 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nkx2-1P50220 372 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Dcaf7P61963 342 aaKnown RBP7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r236Q05A06 334 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1386Q7TQT0 309 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Q8C784 167 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Zfp119bQ8K0G9 543 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Nxph3Q91VX5 252 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem123Q91Z22 195 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Q9CYS6 286 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 9230110F15RikQ9D262 117 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sgms2Q9D4B1 365 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 1700025F22RikQ9D9Y7 111 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Reep6Q9JM62 201 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tcrg-V7A0A0A6YYE8 116 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gm5890A0A140LI04 305 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr587-ps1A0A1B0GSS1 159 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr872E9PVW2 323 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1471F6QVZ8 314 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Vmn1r194J3JS27 296 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr889L7N1Y6 314 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tbx15O70306 602 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Igh-3P01867 404 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Gdf1P20863 357 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Lyl1P27792 278 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Prrc1Q3UPH1 443 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 AbraclQ4KML4 81 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Smug1Q6P5C5 279 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Cfap161Q6P8Y0 303 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Slc22a27Q76M72 551 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Wdyhv1Q80WB5 209 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ifna16Q810G1 189 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mospd3Q8BGG6 235 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tmem11Q8BK08 190 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Sp110Q8BVK9 445 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr360Q8VFP3 317 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Il24Q925S4 181 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ddah2Q99LD8 285 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Dnaja3Q99M87 480 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Riox1Q9JJF3 603 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Herpud1Q9JJK5 391 aa7.77□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1490A0A1L1SVH0 321 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr554E9Q546 317 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ifna1P01572 189 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Ifna2P01573 190 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 JPT1P97825 154 aaKnown RBP7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Smim15Q3UTD9 74 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Slc16a11Q5NC32 447 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Tgfbr1Q64729 503 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Smap2Q7TN29 428 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1137Q7TR40 310 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1394Q8VET2 312 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr827Q8VEV5 322 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr822Q8VFU1 312 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Mrps30Q9D0G0 442 aaKnown RBP7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 1700013G24RikQ9DAC6 286 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 MNCb-2990Q9JJ93 142 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa7.76□□□□□ -1.17
Col28a1-201ENSMUST00000115537 Olfr1157A2AVC4 312 aa7.76□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms