RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 MAGT1Q9H0U3 335 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 TAS2R3Q9NYW6 316 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 CACNG5Q9UF02 275 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 TNFRSF13BO14836 293 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-208ENST00000641023 GNLYP22749 145 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 PPOXP50336 477 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 CAV2P51636 162 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 RPL31P62899 125 aaKnown RBP14.29□□□□□ -0.12
PHGDH-208ENST00000641023 FAM74A1Q5RGS3 127 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 EIF5AL1Q6IS14 154 aaKnown RBP14.29□□□□□ -0.12
PHGDH-208ENST00000641023 TCF23Q7RTU1 214 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 COMMD7Q86VX2 200 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 ABHD14AQ9BUJ0 271 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 GAL3ST2Q9H3Q3 398 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 IDI2-AS1Q9NZ38 188 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 KAAG1Q9UBP8 84 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 MMP24Q9Y5R2 645 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 ARFGEF3Q5TH69 2177 aa14.29□□□□□ -0.12
PHGDH-208ENST00000641023 ZG16O60844 167 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 GAPDHP04406 335 aaKnown RBP14.28□□□□□ -0.12
PHGDH-208ENST00000641023 UQCRFS1P47985 274 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 ZNF816Q0VGE8 651 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-208ENST00000641023 OR2B11Q5JQS5 317 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 RPL7L1Q6DKI1 246 aaKnown RBP14.28□□□□□ -0.12
PHGDH-208ENST00000641023 Q6ZRM9 215 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 LRRC20Q8TCA0 184 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 SLC25A31Q9H0C2 315 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 IFI27L2Q9H2X8 130 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 C11orf1Q9H5F2 150 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 LYRM2Q9NU23 88 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-208ENST00000641023 GAB2Q9UQC2 676 aa14.28□□□□□ -0.12
PHGDH-208ENST00000641023 LINC00473A8K010 186 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 C17orf98A8MV24 154 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 CHST1O43916 411 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 IGHV3-7P01780 117 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 NFYBP25208 207 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 DUTP33316 252 aaKnown RBP14.27□□□□□ -0.12
PHGDH-208ENST00000641023 SMIM3Q9BZL3 60 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 MED9Q9NWA0 146 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 COA4Q9NYJ1 87 aa14.27□□□□□ -0.12
PHGDH-208ENST00000641023 KRASP01116 189 aa14.27□□□□□ -0.13
PHGDH-208ENST00000641023 IZUMO4Q1ZYL8 232 aa14.27□□□□□ -0.13
PHGDH-208ENST00000641023 OR10A7Q8NGE5 316 aa14.27□□□□□ -0.13
PHGDH-208ENST00000641023 LPAR3Q9UBY5 353 aa14.27□□□□□ -0.13
PHGDH-208ENST00000641023 PFDN2Q9UHV9 154 aa14.27□□□□□ -0.13
PHGDH-208ENST00000641023 PROP1O75360 226 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 NXPH3O95157 252 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 BRWD1-AS2P59051 145 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 NHLH2Q02577 135 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 LYPD2Q6UXB3 125 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 RNF141Q8WVD5 230 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 ITLN2Q8WWU7 325 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-208ENST00000641023 CXorf58Q96LI9 332 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 RAB40CQ96S21 281 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 RAB1BQ9H0U4 201 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 CBLN4Q9NTU7 201 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 DSCAML1Q8TD84 2053 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 FAM24AA6NFZ4 105 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 KIAA1324LA8MWY0 1029 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-208ENST00000641023 RAB29O14966 203 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 S1PR2O95136 353 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 G6PCP35575 357 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 EWSR1Q01844 656 aaKnown RBP eCLIP14.26□□□□□ -0.13
PHGDH-208ENST00000641023 CT45A1Q5HYN5 189 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 CLEC9AQ6UXN8 241 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-208ENST00000641023 CT45A3Q8NHU0 189 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 TMED6Q8WW62 240 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 LEAP2Q969E1 77 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 C19orf12Q9NSK7 152 aa14.26□□□□□ -0.13
PHGDH-208ENST00000641023 RPUSD1Q9UJJ7 312 aaKnown RBP14.26□□□□□ -0.13
PHGDH-208ENST00000641023 HIVEP3Q5T1R4 2406 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 BORCS7-ASMTA0A0B4J1R7 106 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 M0R1X1 148 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 DVL1O14640 695 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 TOR1AO14656 332 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 FSTL3O95633 263 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 H1FXQ92522 213 aaKnown RBP14.25□□□□□ -0.13
PHGDH-208ENST00000641023 ZNF714Q96N38 554 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 PRELID3BQ9Y3B1 194 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 HCFC1P51610 2035 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 TANC2Q9HCD6 1990 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 USF3Q68DE3 2245 aa14.25□□□□□ -0.13
PHGDH-208ENST00000641023 FAM90A26D6RGX4 464 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 SLC31A2O15432 143 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 SYNGR2O43760 224 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 COL8A2P25067 703 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 LINC00205P59089 165 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 RPL23AP62750 156 aaKnown RBP14.24□□□□□ -0.13
PHGDH-208ENST00000641023 ZNF273Q14593 569 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 RPL39P5Q59GN2 51 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 NCR3LG1Q68D85 454 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 TMEM200BQ69YZ2 307 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 WSB1Q9Y6I7 421 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 B8ZZF3 427 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 HPRT1P00492 218 aa14.24□□□□□ -0.13
PHGDH-208ENST00000641023 BAXQ07812 192 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms