RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 MLLT11Q13015 90 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 PLGLAQ15195 96 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 TRAM1Q15629 374 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 DRAXINQ8NBI3 349 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ALX4Q9H161 411 aaPredicted RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 Q9N2K0 584 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 ISYNA1Q9NPH2 558 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 C12orf4Q9NQ89 552 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 RNF150Q9ULK6 438 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 WASHC3Q9Y3C0 194 aa10.81□□□□□ -0.68
LINC00339-211ENST00000641009 LSM4Q9Y4Z0 139 aaKnown RBP10.81□□□□□ -0.68
LINC00339-211ENST00000641009 HUWE1Q7Z6Z7 4374 aaKnown RBP10.8□□□□□ -0.68
LINC00339-211ENST00000641009 ITGB1BP1O14713 200 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 PROP1O75360 226 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 CRHBPP24387 322 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 PSMA1P25786 263 aaKnown RBP10.8□□□□□ -0.68
LINC00339-211ENST00000641009 MC5RP33032 325 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 LINC00205P59089 165 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 PLA2G7Q13093 441 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 C2orf76Q3KRA6 126 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 PLAC9Q5JTB6 97 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 ZNF660Q6AZW8 331 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-211ENST00000641009 OR5AN1Q8NGI8 311 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 EDARADDQ8WWZ3 215 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 FAM3DQ96BQ1 224 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 CLCC1Q96S66 551 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 MGLLQ99685 303 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 CMSS1Q9BQ75 279 aaKnown RBP10.8□□□□□ -0.68
LINC00339-211ENST00000641009 PECRQ9BY49 303 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
LINC00339-211ENST00000641009 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-211ENST00000641009 CRIP2P52943 208 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-211ENST00000641009 HES5Q5TA89 166 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 PRSS48Q7RTY5 328 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 ABHD5Q8WTS1 349 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 DCUN1D4Q92564 292 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 FAM103A1Q9BTL3 118 aaKnown RBP10.79□□□□□ -0.68
LINC00339-211ENST00000641009 GHITMQ9H3K2 345 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 MGAT4AQ9UM21 535 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 FOXA2Q9Y261 457 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-211ENST00000641009 V9GY05 133 aa10.79□□□□□ -0.68
LINC00339-211ENST00000641009 TMEM272A0A1B0GTI8 110 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 DENRO43583 198 aaKnown RBP10.78□□□□□ -0.68
LINC00339-211ENST00000641009 IGKV1-16P04430 117 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 PTX4Q96A99 478 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 WWC2-AS2Q96NR7 200 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC00339-211ENST00000641009 METTL1Q9UBP6 276 aaKnown RBP10.78□□□□□ -0.68
LINC00339-211ENST00000641009 ZNF256Q9Y2P7 627 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-211ENST00000641009 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 TNCP24821 2201 aa10.78□□□□□ -0.68
LINC00339-211ENST00000641009 TRDCB7Z8K6 153 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 LDLRAD4O15165 306 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 RBBP9O75884 186 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 LY86O95711 162 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 CA2P00918 260 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 SLURP1P55000 103 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 PSG5Q15238 335 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 MOGAT2Q3SYC2 334 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 PPP1R27Q86WC6 154 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF383Q8NA42 475 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 OR56B1Q8NGI3 324 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 TOLLIPQ9H0E2 274 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 ACOT13Q9NPJ3 140 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 RDH8Q9NYR8 311 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 ZNF221Q9UK13 617 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 KCNK7Q9Y2U2 307 aa10.77□□□□□ -0.69
LINC00339-211ENST00000641009 RYR3Q15413 4870 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 IGHV4OR15-8A0A075B7B6 117 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 A0A087WW49 117 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 OVOL1O14753 267 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 CD3GP09693 182 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 INSL3P51460 131 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 OR10A3P58181 314 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 TMEM267Q0VDI3 215 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-211ENST00000641009 SSX1Q16384 188 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 ACTBL2Q562R1 376 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 CD200R1LQ6Q8B3 271 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 UNQ5815/PRO19632Q6UWF5 114 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 TCTEX1D1Q8N7M0 179 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 LFNGQ8NES3 379 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-211ENST00000641009 CNBD2Q96M20 576 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 MS4A10Q96PG2 267 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 RNF5Q99942 180 aa10.76□□□□□ -0.69
LINC00339-211ENST00000641009 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 LINC01619G3V211 115 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 M0R1X1 148 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 TFAP2AP05549 437 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 LGALS1P09382 135 aaKnown RBP10.75□□□□□ -0.69
LINC00339-211ENST00000641009 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-211ENST00000641009 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
LINC00339-211ENST00000641009 TBCEQ15813 527 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-211ENST00000641009 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
LINC00339-211ENST00000641009 IGSF11Q5DX21 431 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms