RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PLGLAQ15195 96 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 OR5AN1Q8NGI8 311 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 OR10R2Q8NGX6 335 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 FCGR1BQ92637 280 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 YTHDF1Q9BYJ9 559 aaKnown RBP19.72■□□□□ 0.75
VEGFA-232ENST00000640653 RNF150Q9ULK6 438 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 WSB1Q9Y6I7 421 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 IGKV1-6A0A0C4DH72 117 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 METTL21EPA6NDL7 271 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 PPIFP30405 207 aaKnown RBP19.71■□□□□ 0.75
VEGFA-232ENST00000640653 HOXD3P31249 432 aaPredicted RBP19.71■□□□□ 0.75
VEGFA-232ENST00000640653 KRTAP10-11P60412 298 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 DEFB136Q30KP8 78 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 MOGAT2Q3SYC2 334 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 TMEM65Q6PI78 240 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 SPARTQ8N0X7 666 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 C4orf3Q8WVX3 66 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 RNF5Q99942 180 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 RDH8Q9NYR8 311 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 KCNK7Q9Y2U2 307 aa19.71■□□□□ 0.75
VEGFA-232ENST00000640653 TRAV41A0A0B4J266 112 aa19.7■□□□□ 0.74
VEGFA-232ENST00000640653 G3V318 75 aa19.7■□□□□ 0.74
VEGFA-232ENST00000640653 RRHO14718 337 aa19.7■□□□□ 0.74
VEGFA-232ENST00000640653 FABP7O15540 132 aa19.7■□□□□ 0.74
VEGFA-232ENST00000640653 FBXL15Q9H469 300 aa19.7■□□□□ 0.74
VEGFA-232ENST00000640653 MFNGO00587 321 aa19.69■□□□□ 0.74
VEGFA-232ENST00000640653 FCGR3AP08637 254 aa19.69■□□□□ 0.74
VEGFA-232ENST00000640653 HIST1H1DP16402 221 aaKnown RBP19.69■□□□□ 0.74
VEGFA-232ENST00000640653 GNB3P16520 340 aa19.69■□□□□ 0.74
VEGFA-232ENST00000640653 ZNF660Q6AZW8 331 aaPredicted RBP19.69■□□□□ 0.74
VEGFA-232ENST00000640653 OR5M8Q8NGP6 311 aa19.69■□□□□ 0.74
VEGFA-232ENST00000640653 ZMAT5Q9UDW3 170 aaKnown RBP19.69■□□□□ 0.74
VEGFA-232ENST00000640653 A0A075B6Q4 140 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 K7EIL1 84 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 RAB27BO00194 218 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 TFAP2AP05549 437 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 FGF9P31371 208 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-232ENST00000640653 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-232ENST00000640653 MYOZ3Q8TDC0 251 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 CABLES2Q9BTV7 478 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 TOLLIPQ9H0E2 274 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 STUB1Q9UNE7 303 aa19.68■□□□□ 0.74
VEGFA-232ENST00000640653 A0A0B4J203 849 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 BET1O15155 118 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 DIRAS3O95661 229 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 IGLV1-40P01703 118 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 APOA2P02652 100 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 ARL6IP1Q15041 203 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 DRAXINQ8NBI3 349 aaPredicted RBP19.67■□□□□ 0.74
VEGFA-232ENST00000640653 OR10J5Q8NHC4 309 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 UBE2E2Q96LR5 201 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 CENPOQ9BU64 300 aa19.67■□□□□ 0.74
VEGFA-232ENST00000640653 TXNL4BQ9NX01 149 aaKnown RBP19.67■□□□□ 0.74
VEGFA-232ENST00000640653 NOTOA8MTQ0 251 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 PROP1O75360 226 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 GSTT2P0CG29 244 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 GSTT2BP0CG30 244 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 TALDO1P37837 337 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 CRIP2P52943 208 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-232ENST00000640653 CX3CL1P78423 397 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 ARFRP1Q13795 201 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 ECSCRQ19T08 205 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 IGSF11Q5DX21 431 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 NR2C2APQ86WQ0 139 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 PDPNQ86YL7 162 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 TCTEX1D1Q8N7M0 179 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 ZNF491Q8N8L2 437 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 ZNF383Q8NA42 475 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 MINDY2Q8NBR6 621 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 TSNAXQ99598 290 aaKnown RBP19.66■□□□□ 0.74
VEGFA-232ENST00000640653 ATG5Q9H1Y0 275 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 KLK15Q9H2R5 256 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 SSR3Q9UNL2 185 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 VSIG4Q9Y279 399 aa19.66■□□□□ 0.74
VEGFA-232ENST00000640653 WI2-2373I1.2A0A1W2PRP0 233 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 SPDEFO95238 335 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 RAB9AP51151 201 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 NDPQ00604 133 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 TMEM267Q0VDI3 215 aaPredicted RBP19.65■□□□□ 0.74
VEGFA-232ENST00000640653 TPRA1Q86W33 373 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 ABHD5Q8WTS1 349 aa19.65■□□□□ 0.74
VEGFA-232ENST00000640653 METTL1Q9UBP6 276 aaKnown RBP19.65■□□□□ 0.74
VEGFA-232ENST00000640653 TRBV6-7A0A0A0MS04 114 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 SMIM30A4D0T7 59 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 M0R1X1 148 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 OR8U9P0C7N5 309 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 RPS16P62249 146 aaKnown RBP19.64■□□□□ 0.73
VEGFA-232ENST00000640653 FHL3Q13643 280 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 PSG5Q15238 335 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 SRSF7Q16629 238 aaKnown RBP eCLIP19.64■□□□□ 0.737e-11■□□□□ 10.2
VEGFA-232ENST00000640653 DEFB121Q5J5C9 76 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 ZNF773Q6PK81 442 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 OR11H1Q8NG94 326 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 MAFIPQ8WZ33 124 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 OR2D2Q9H210 308 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 ZNF230Q9UIE0 474 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-232ENST00000640653 GAB2Q9UQC2 676 aa19.64■□□□□ 0.73
VEGFA-232ENST00000640653 FOXA2Q9Y261 457 aaPredicted RBP19.64■□□□□ 0.73
VEGFA-232ENST00000640653 A0A1W2PN81 502 aa19.63■□□□□ 0.73
VEGFA-232ENST00000640653 FCN1O00602 326 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms