RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FBXW9Q5XUX1 488 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 FIP1L1Q6UN15 594 aaKnown RBP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 C1QL4Q86Z23 238 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 OR8G5Q8NG78 346 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 CA5BP1Q8WTZ4 195 aa12.31□□□□□ -0.44
SCARB2-221ENST00000640341 SPENQ96T58 3664 aaKnown RBP12.31□□□□□ -0.44
SCARB2-221ENST00000640341 CXorf65A6NEN9 183 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 OR5H1A6NKK0 313 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 FGF7P21781 194 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 SSTR5P35346 364 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 LRRC75BQ2VPJ9 315 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
SCARB2-221ENST00000640341 DCTN5Q9BTE1 182 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 VAX2Q9UIW0 290 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 PCSK5Q92824 1860 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 A0A087WWC5 75 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 SP1P08047 785 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 MPLP40238 635 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 TFF3Q07654 80 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 RNPS1Q15287 305 aaKnown RBP12.3□□□□□ -0.44
SCARB2-221ENST00000640341 RNFT1Q5M7Z0 435 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 GALMQ96C23 342 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
SCARB2-221ENST00000640341 HAND1O96004 215 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 IFNA1P01562 189 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 COX5BP10606 129 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 GAMTQ14353 236 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 TMEM41BQ5BJD5 291 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 ACSM6Q6P461 480 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 TMEM204Q9BSN7 226 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 ELOVL1Q9BW60 279 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
SCARB2-221ENST00000640341 CYB5R3P00387 301 aaPredicted RBP12.29□□□□□ -0.44
SCARB2-221ENST00000640341 CRYAAP02489 173 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 DEFA6Q01524 100 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 TNFRSF9Q07011 255 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 FFAR4Q5NUL3 377 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 ZNF497Q6ZNH5 498 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 C16orf82Q7Z2V1 217 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 SDF2L1Q9HCN8 221 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 MRPS18CQ9Y3D5 142 aaKnown RBP12.29□□□□□ -0.44
SCARB2-221ENST00000640341 LNP1A1A4G5 178 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 C17orf98A8MV24 154 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 C12orf77C9JDV5 145 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 WISP2O76076 250 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 MPV17P39210 176 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 Q3ZCU0 254 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 TECTAO75443 2155 aa12.29□□□□□ -0.44
SCARB2-221ENST00000640341 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
SCARB2-221ENST00000640341 A0A0U1RQK1 487 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 ODAMA1E959 279 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 TNFSF15O95150 251 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 HNF1AP20823 631 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 PSG7Q13046 419 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 MRPL49Q13405 166 aaKnown RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 ZNF709Q8N972 641 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 WFIKKN1Q96NZ8 548 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 PAGE4O60829 102 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 MEF2BQ02080 365 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 MRGPRGQ86SM5 289 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 LSM10Q969L4 123 aaKnown RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 SMPD2O60906 423 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 HBZP02008 142 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 ACP1P24666 158 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 PSMB3P49720 205 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 HIST3H2BBQ8N257 126 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-221ENST00000640341 SPRR3Q9UBC9 169 aa12.28□□□□□ -0.44
SCARB2-221ENST00000640341 CHRNA7P36544 502 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 CD81P60033 236 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 LINC00596Q86U02 117 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 OR51G1Q8NGK1 321 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 TRIB1Q96RU8 372 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 PKIBQ9C010 78 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 OPA3Q9H6K4 179 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 METRNQ9UJH8 293 aa12.27□□□□□ -0.44
SCARB2-221ENST00000640341 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-221ENST00000640341 H7BYZ3 331 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 DPPA3Q6W0C5 159 aa12.27□□□□□ -0.45
SCARB2-221ENST00000640341 DTD1Q8TEA8 209 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms