RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 HKR1P10072 659 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 CD1BP29016 333 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 OR4X1Q8NH49 305 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 TNFRSF19Q9NS68 423 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 SLC2A8Q9NY64 477 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 PITX3O75364 302 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 CRYBA1P05813 215 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 EFNB1P98172 346 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 Q6ZT83 130 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 PCGF1Q9BSM1 259 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 MANBALQ9NQG1 85 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 SPG11Q96JI7 2443 aa12.29□□□□□ -0.44
SCARB2-208ENST00000638372 C9orf172C9J069 976 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-208ENST00000638372 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 LOC102723971A0A1B0GUV8 181 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 PDPNQ86YL7 162 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 OR10G8Q8NGN5 311 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 LRRC3CA6NJW4 275 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 SSTR5P35346 364 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 ZNF714Q96N38 554 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 ZNF319Q9P2F9 582 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 OR51B2Q9Y5P1 312 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
SCARB2-208ENST00000638372 SLC16A13Q7RTY0 426 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 PUSL1Q8N0Z8 303 aaKnown RBP12.28□□□□□ -0.44
SCARB2-208ENST00000638372 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 SNX22Q96L94 193 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 DEPPQ9NTK1 212 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 COA4Q9NYJ1 87 aa12.28□□□□□ -0.44
SCARB2-208ENST00000638372 CISD1Q9NZ45 108 aaKnown RBP12.28□□□□□ -0.44
SCARB2-208ENST00000638372 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.44
SCARB2-208ENST00000638372 RAB5AP20339 215 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 PAX6P26367 422 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 FHITP49789 147 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 SLC24A4Q8NFF2 622 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 AQP10Q96PS8 301 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 TP53RKQ96S44 253 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 LINC00470Q9BZP3 86 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 EFNA2O43921 213 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 CALYQ9NYX4 217 aa12.27□□□□□ -0.44
SCARB2-208ENST00000638372 LOC102723996A0A087X1L8 192 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 WNT5AP41221 380 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 TNFSF10P50591 281 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 TOMM20LQ6UXN7 152 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 OR4C12Q96R67 309 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 COL4A6Q14031 1691 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 IGKV3-7A0A075B6H7 116 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 J3QRE1 110 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.45
SCARB2-208ENST00000638372 BRS3P32247 399 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 PMS2P11Q13670 270 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 ASCL5Q7RTU5 278 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 SELENOHQ8IZQ5 122 aaKnown RBP12.27□□□□□ -0.45
SCARB2-208ENST00000638372 HILPDAQ9Y5L2 63 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.45
SCARB2-208ENST00000638372 PRR19A6NJB7 356 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 HOXD4P09016 255 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 FCER1GP30273 86 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 SERF2P84101 59 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 SAXO1Q8IYX7 474 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 OR5P3Q8WZ94 311 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 NUDT16L1Q9BRJ7 211 aaKnown RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 TLNRD1Q9H1K6 362 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 ASCL3Q9NQ33 180 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 CLEC5AQ9NY25 188 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 MSGN1A6NI15 193 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 M0QZ24 198 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 ZNF708P17019 499 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 TPPP2P59282 170 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 SUMO1P63165 101 aaKnown RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 FAM27E3Q08E93 113 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 CSRP2Q16527 193 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 SLC25A53Q5H9E4 307 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 NOL4LQ96MY1 436 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 MGAMO43451 1857 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 FNDC1Q4ZHG4 1894 aaPredicted RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 SEC14L6B5MCN3 397 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 F2RL2O00254 374 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 NPVFQ9HCQ7 196 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 IL36RNQ9UBH0 155 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 TUBD1Q9UJT1 453 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 MPTX1A8MV57 137 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 MELTFP08582 738 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 CECR9P0C854 216 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 TMEM187Q14656 261 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 KHDC3LQ587J8 217 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
SCARB2-208ENST00000638372 VKORC1L1Q8N0U8 176 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 NOTCH2Q04721 2471 aa12.26□□□□□ -0.45
SCARB2-208ENST00000638372 NOTCH4Q99466 2003 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms