RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TMEM30CPA0ZSE6 113 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 LRRC30A6NM36 301 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 SMPD2O60906 423 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 PPP1CBP62140 327 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 GALMQ96C23 342 aa16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.92■□□□□ 0.3
SYNGAP1-227ENST00000638142 C21orf140B9A014 251 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 RAMP3O60896 148 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 RNF224P0DH78 156 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 RAC2P15153 192 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 FOSL1P15407 271 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 FGF7P21781 194 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 MEOX1P50221 254 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 TAS2R60P59551 318 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 RPL23P62829 140 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 CATR1Q13166 79 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 Q3ZCU0 254 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 FIP1L1Q6UN15 594 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR2J1Q9GZK6 312 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR2D2Q9H210 308 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 SLC25A22Q9H936 323 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 KLF13Q9Y2Y9 288 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 R4GN57 208 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 DNAJC13O75165 2243 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 HAND1O96004 215 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 KRASP01116 189 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 GABRA6Q16445 453 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR1P1Q8NH06 330 aa16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 RPUSD4Q96CM3 377 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 MRPL37Q9BZE1 423 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 ACTR3CQ9C0K3 210 aaPredicted RBP16.91■□□□□ 0.3
SYNGAP1-227ENST00000638142 AMBPP02760 352 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 SP1P08047 785 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 GZMBP10144 247 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 G6PCP35575 357 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 EIF4EBP1Q13541 118 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR10G9Q8NGN4 311 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR10G7Q8NGN6 311 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR5B12Q96R08 314 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 C2orf88Q9BSF0 95 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 FOXJ2Q9P0K8 574 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 ODAMA1E959 279 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 PMS2P5A8MQ11 134 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 H7BYZ3 331 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR10P1Q8NGE3 313 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR51G1Q8NGK1 321 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 OR1L1Q8NH94 360 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 PARLQ9H300 379 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 SMOC1Q9H4F8 434 aa16.9■□□□□ 0.3
SYNGAP1-227ENST00000638142 TMEM210A6NLX4 147 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 KLRC4-KLRK1H3BQV0 150 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 ST8SIA5O15466 376 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 CD55P08174 381 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 COX5AP20674 150 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 MDKP21741 143 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 OR3A1P47881 315 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 RPL30P62888 115 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 COL10A1Q03692 680 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 SLC10A1Q14973 349 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF766Q5HY98 468 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 CIB3Q96Q77 187 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 CLN8Q9UBY8 286 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 VPS13AQ96RL7 3174 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 C12orf77C9JDV5 145 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 GALR1P47211 349 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF816Q0VGE8 651 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 MYPOPQ86VE0 399 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 TCTEX1D1Q8N7M0 179 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 DTD1Q8TEA8 209 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 NOL4LQ96MY1 436 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 HES4Q9HCC6 221 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 GAB2Q9UQC2 676 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 DOCK7Q96N67 2140 aa16.89■□□□□ 0.29
SYNGAP1-227ENST00000638142 FRYLO94915 3013 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 FREM2Q5SZK8 3169 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 OOEPA6NGQ2 149 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 IQCF6A8MYZ5 107 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 PSPNO60542 156 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 FFAR4Q5NUL3 377 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 SLC35E4Q6ICL7 350 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 DEFB123Q8N688 67 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 C5orf30Q96GV9 206 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 LAMP3Q9UQV4 416 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 PPP5D1E7EU14 171 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 HMGB3O15347 200 aaKnown RBP16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 S1PR2O95136 353 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 CLDN14O95500 239 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 CELA3BP08861 270 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 VWC2Q2TAL6 325 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 VASH2Q86V25 355 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 OR4F5Q8NH21 305 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 RAB24Q969Q5 203 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 ANAPC16Q96DE5 110 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 OR4F4Q96R69 305 aa16.88■□□□□ 0.29
SYNGAP1-227ENST00000638142 A8MWP6 167 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 RAB29O14966 203 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 GRPP07492 148 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 SELEP16581 610 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 HNF4GQ14541 408 aa16.87■□□□□ 0.29
SYNGAP1-227ENST00000638142 ZNF808Q8N4W9 903 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms