RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 NDUFB3O43676 98 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 NDUFA2O43678 99 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 RAMP3O60896 148 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 PROP1O75360 226 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 MMP9P14780 707 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 PVALBP20472 110 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF134P52741 427 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 TMEM33P57088 247 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 RPL31P62899 125 aaKnown RBP10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 OR2B11Q5JQS5 317 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 C11orf71Q6IPW1 123 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 LYPD2Q6UXB3 125 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 Q6ZRM9 215 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 BAP18Q8IXM2 172 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF439Q8NDP4 499 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 CBLN4Q9NTU7 201 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 LPAR3Q9UBY5 353 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 CACNG5Q9UF02 275 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 GAB2Q9UQC2 676 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
CACNA1D-228ENST00000638120 ACACBO00763 2458 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 SLC31A2O15432 143 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 SSSCA1O60232 199 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 FSTL3O95633 263 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 GAPDHP04406 335 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 DUTP33316 252 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF273Q14593 569 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 IZUMO4Q1ZYL8 232 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 UTF1Q5T230 341 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 OR2C3Q8N628 320 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 OR10A7Q8NGE5 316 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 LEAP2Q969E1 77 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 SLC25A32Q9H2D1 315 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 GAL3ST2Q9H3Q3 398 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 LEUTXA8MZ59 168 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 ATG12O94817 140 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 S1PR2O95136 353 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 IGHV3-7P01780 117 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 P0C879 139 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 NFYBP25208 207 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 EIF5AP63241 154 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 FAM74A1Q5RGS3 127 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 PRAMEF5Q5TYX0 476 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 RPL7L1Q6DKI1 246 aaKnown RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 LAMP3Q9UQV4 416 aa10.1□□□□□ -0.79
CACNA1D-228ENST00000638120 USF3Q68DE3 2245 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 ANKRD34BA5PLL1 514 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 B8ZZF3 427 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 M0R1X1 148 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 WRBO00258 174 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 DVL1O14640 695 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 MMP23AO75900 390 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 NXPH3O95157 252 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 RRASP10301 218 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 COL8A2P25067 703 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 VAMP2P63027 116 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 EWSR1Q01844 656 aaKnown RBP eCLIP10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 RPL39P5Q59GN2 51 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 NCR3LG1Q68D85 454 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 PDZD9Q8IXQ8 264 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 H1FXQ92522 213 aaKnown RBP10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 ZNF714Q96N38 554 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 RAB1BQ9H0U4 201 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 MED9Q9NWA0 146 aa10.09□□□□□ -0.79
CACNA1D-228ENST00000638120 SAA2-SAA4A0A096LPE2 208 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 IGSF23A1L1A6 192 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 LYNX1G3V0Z9 82 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 CHST1O43916 411 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 TMEM50AO95807 157 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 IGHV2-70P01814 119 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 SOD3P08294 240 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 SAA2P0DJI9 122 aaPredicted RBP10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 LYNX1P0DP58 116 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 G6PCP35575 357 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 CAV2P51636 162 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 LINC00205P59089 165 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 TMEM200BQ69YZ2 307 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 HEPN1Q6WQI6 88 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 DTX2Q86UW9 622 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 BSCL2Q96G97 398 aaPredicted RBP10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 CXorf58Q96LI9 332 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 SMIM3Q9BZL3 60 aa10.08□□□□□ -0.8
CACNA1D-228ENST00000638120 ABCA4P78363 2273 aa10.07□□□□□ -0.8
CACNA1D-228ENST00000638120 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
CACNA1D-228ENST00000638120 FAM24AA6NFZ4 105 aa10.07□□□□□ -0.8
CACNA1D-228ENST00000638120 FAM90A26D6RGX4 464 aa10.07□□□□□ -0.8
CACNA1D-228ENST00000638120 TOR1AO14656 332 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms