RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 LSM4Q9Y4Z0 139 aaKnown RBP15.6■□□□□ 0.09
CLN6-222ENST00000637667 SORL1Q92673 2214 aa15.6■□□□□ 0.09
CLN6-222ENST00000637667 H7C2Y5 167 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 SCTP09683 121 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 CALRP27797 417 aaKnown RBP15.59■□□□□ 0.09
CLN6-222ENST00000637667 VEGFCP49767 419 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 CLDN12P56749 244 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 PTX4Q96A99 478 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 FAM3DQ96BQ1 224 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 PECRQ9BY49 303 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 FOXA2Q9Y261 457 aaPredicted RBP15.59■□□□□ 0.09
CLN6-222ENST00000637667 STAB2Q8WWQ8 2551 aa15.59■□□□□ 0.09
CLN6-222ENST00000637667 A0A1W2PN81 502 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 FCN1O00602 326 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 SOX15O60248 233 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 CRHBPP24387 322 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 CHRNA7P36544 502 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 FABP5Q01469 135 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 C2orf76Q3KRA6 126 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 PRSS48Q7RTY5 328 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 TCTEX1D1Q8N7M0 179 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 ABHD5Q8WTS1 349 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 MGLLQ99685 303 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 RNF5Q99942 180 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 CMSS1Q9BQ75 279 aaKnown RBP15.58■□□□□ 0.08
CLN6-222ENST00000637667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.58■□□□□ 0.08
CLN6-222ENST00000637667 RNF150Q9ULK6 438 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 A3GALT2U3KPV4 340 aa15.58■□□□□ 0.08
CLN6-222ENST00000637667 EGR2P11161 476 aaPredicted RBP15.57■□□□□ 0.08
CLN6-222ENST00000637667 RANBP1P43487 201 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 MAP2K4P45985 399 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 INSL3P51460 131 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 PLAC9Q5JTB6 97 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 DRAXINQ8NBI3 349 aaPredicted RBP15.57■□□□□ 0.08
CLN6-222ENST00000637667 OR56B1Q8NGI3 324 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 WWC2-AS2Q96NR7 200 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 ACOT13Q9NPJ3 140 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 ZNF221Q9UK13 617 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 ZNF256Q9Y2P7 627 aaPredicted RBP15.57■□□□□ 0.08
CLN6-222ENST00000637667 NUBP2Q9Y5Y2 271 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 V9GY05 133 aa15.57■□□□□ 0.08
CLN6-222ENST00000637667 IGKV1-6A0A0C4DH72 117 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 TRDCB7Z8K6 153 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 LDLRAD4O15165 306 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 PROP1O75360 226 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
CLN6-222ENST00000637667 PSMD7P51665 324 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 TMEM267Q0VDI3 215 aaPredicted RBP15.56■□□□□ 0.08
CLN6-222ENST00000637667 CD200R1LQ6Q8B3 271 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 CASTOR1Q8WTX7 329 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 DCUN1D4Q92564 292 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 ALX4Q9H161 411 aaPredicted RBP15.56■□□□□ 0.08
CLN6-222ENST00000637667 METTL1Q9UBP6 276 aaKnown RBP15.56■□□□□ 0.08
CLN6-222ENST00000637667 GAB2Q9UQC2 676 aa15.56■□□□□ 0.08
CLN6-222ENST00000637667 TMEM272A0A1B0GTI8 110 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 OVOL1O14753 267 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 DENRO43583 198 aaKnown RBP15.55■□□□□ 0.08
CLN6-222ENST00000637667 PSG5Q15238 335 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 PPP1R27Q86WC6 154 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 ZNF383Q8NA42 475 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 CLCC1Q96S66 551 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 TSNAXQ99598 290 aaKnown RBP15.55■□□□□ 0.08
CLN6-222ENST00000637667 TOLLIPQ9H0E2 274 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 RDH8Q9NYR8 311 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 RAB22AQ9UL26 194 aa15.55■□□□□ 0.08
CLN6-222ENST00000637667 KMT2CQ8NEZ4 4911 aaKnown RBP15.54■□□□□ 0.08
CLN6-222ENST00000637667 SPDEFO95238 335 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 IGKV1-16P04430 117 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 TFAP2AP05549 437 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 LGALS1P09382 135 aaKnown RBP15.54■□□□□ 0.08
CLN6-222ENST00000637667 LINC00205P59089 165 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 PLA2G7Q13093 441 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 ACTBL2Q562R1 376 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 HES5Q5TA89 166 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 PYHIN1Q6K0P9 492 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 UNQ5815/PRO19632Q6UWF5 114 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 ZNF562Q6V9R5 426 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 ZNF429Q86V71 674 aa15.54■□□□□ 0.08
CLN6-222ENST00000637667 FAM103A1Q9BTL3 118 aaKnown RBP15.54■□□□□ 0.08
CLN6-222ENST00000637667 LINC01619G3V211 115 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 LY86O95711 162 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 APOA2P02652 100 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 CD3GP09693 182 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 SNRPBP14678 240 aaKnown RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 SERPINB10P48595 397 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 SLURP1P55000 103 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 RPS16P62249 146 aaKnown RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 MRPS15P82914 257 aaKnown RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 TBCEQ15813 527 aaPredicted RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 AKIRIN2Q53H80 203 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 ZNF367Q7RTV3 350 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 PDPNQ86YL7 162 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 OR4A4PQ8NGN8 299 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 DLX4Q92988 240 aaPredicted RBP15.53■□□□□ 0.08
CLN6-222ENST00000637667 RAB3CQ96E17 227 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 VCX3BQ9H321 246 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 KCNK7Q9Y2U2 307 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 U3KQK5 164 aa15.53■□□□□ 0.08
CLN6-222ENST00000637667 M0R1X1 148 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms