RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 Q8NA96 180 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 ANXA10Q9UJ72 324 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 GPR132Q9UNW8 380 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 PKDREJQ9NTG1 2253 aa9.75□□□□□ -0.85
CLN6-217ENST00000636964 SEC14L6B5MCN3 397 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 CYB5BO43169 146 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
CLN6-217ENST00000636964 KNG1P01042 644 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 GRPP07492 148 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 ELOBQ15370 118 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 WDR86Q86TI4 376 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RARRES2Q99969 163 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
CLN6-217ENST00000636964 LIME1Q9H400 295 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 ZZEF1O43149 2961 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 K7EP13 123 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 HS3ST1O14792 307 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 ZNF83P51522 516 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 FGF12P61328 243 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 ZNF573Q86YE8 665 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 C11orf42Q8N5U0 333 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 OR11L1Q8NGX0 322 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 CACNG8Q8WXS5 425 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 TGIF2-C20orf24A0A0A6YYL0 155 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 IGHV1-18A0A0C4DH31 117 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 A4D1N5 150 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 OR5H1A6NKK0 313 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 SFT2D2O95562 160 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 OR5H8P0DN80 308 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 ABHD5Q8WTS1 349 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RDH5Q92781 318 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
CLN6-217ENST00000636964 OR51I2Q9H344 312 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 WFDC1Q9HC57 220 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RAB18Q9NP72 206 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 OBP2BQ9NPH6 170 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 CBLN4Q9NTU7 201 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 OSGIN2Q9Y236 505 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RAXQ9Y2V3 346 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 RFNGQ9Y644 331 aa9.74□□□□□ -0.85
CLN6-217ENST00000636964 A0A1B0GV50 99 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 CDIPTO14735 213 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 TSPAN15O95858 294 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 FGF7P21781 194 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 KLF3P57682 345 aaPredicted RBP9.73□□□□□ -0.85
CLN6-217ENST00000636964 S100A10P60903 97 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 P2RY6Q15077 328 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 HAGHQ16775 308 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 TMEM128Q5BJH2 165 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 LHFPL1Q86WI0 220 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 C1orf162Q8NEQ5 155 aaPredicted RBP9.73□□□□□ -0.85
CLN6-217ENST00000636964 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 LPAR2Q9HBW0 351 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 SHANK1Q9Y566 2161 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 CACNA1DQ01668 2161 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 FABP4P15090 132 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 PPP1CCP36873 323 aaKnown RBP9.73□□□□□ -0.85
CLN6-217ENST00000636964 CYCSP99999 105 aaKnown RBP9.73□□□□□ -0.85
CLN6-217ENST00000636964 FAM27E3Q08E93 113 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 ZNF664Q8N3J9 261 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 TOMM40LQ969M1 308 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 MSL2Q9HCI7 577 aa9.73□□□□□ -0.85
CLN6-217ENST00000636964 ELOA3CA0A087WX78 387 aaPredicted RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 OR5B21A6NL26 309 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 TRGC2P03986 189 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 IL2RGP31785 369 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 FXYD4P59646 89 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 ADIPOQQ15848 244 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 ZNF324BQ6AW86 544 aaPredicted RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 DOLPP1Q86YN1 238 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 RTL8AQ9BWD3 113 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 SPTBN1Q01082 2364 aaKnown RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 IGHV2OR16-5A0A0B4J2B6 119 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 M0QZ24 198 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 M0R1B8 84 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 GLI4P10075 376 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 C22orf34Q6ZV56 151 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 FAM58AQ8N1B3 248 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 SNRNP40Q96DI7 357 aaKnown RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 TMEM140Q9NV12 185 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 RCL1Q9Y2P8 373 aaKnown RBP9.72□□□□□ -0.85
CLN6-217ENST00000636964 SLC25A15Q9Y619 301 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 URGCP-MRPS24S4R325 110 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 DANCRP0C864 163 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 IRF2P14316 349 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 FPR2P25090 351 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 CD1BP29016 333 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 TIMP3P35625 211 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 CCL20P78556 96 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 ZNF154Q13106 437 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 BATFQ16520 125 aa9.72□□□□□ -0.85
CLN6-217ENST00000636964 GFRALQ6UXV0 394 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms