RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ZNF2Q9BSG1 426 aaPredicted RBP12.88□□□□□ -0.35
CLN6-216ENST00000636876 DPAGT1Q9H3H5 408 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 ABCB10Q9NRK6 738 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 GAB2Q9UQC2 676 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
CLN6-216ENST00000636876 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 PROP1O75360 226 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 VENTXO95231 258 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 IFNA6P05013 189 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 AKAIN1P0CW23 69 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 BRS3P32247 399 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 TSPAN5P62079 268 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 MEF2DQ14814 521 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 SLC9A3R2Q15599 337 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 MOB3BQ86TA1 216 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 ARRDC1Q8N5I2 433 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 OR4D10Q8NGI6 311 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 OR5R1Q8NH85 324 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 CFHR4Q92496 578 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 MOB3AQ96BX8 217 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 C5orf30Q96GV9 206 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
CLN6-216ENST00000636876 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
CLN6-216ENST00000636876 CUBNO60494 3623 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 CLDN34H7C241 214 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 M0R1X1 148 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 SLC22A5O76082 557 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 RAB13P51153 203 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 FXYD4P59646 89 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 AP3S2P59780 193 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 KLF9Q13886 244 aaPredicted RBP12.86□□□□□ -0.35
CLN6-216ENST00000636876 HABP2Q14520 560 aaPredicted RBP12.86□□□□□ -0.35
CLN6-216ENST00000636876 BAK1Q16611 211 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 TMEM17Q86X19 198 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 ZNF645Q8N7E2 425 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 OR4C16Q8NGL9 310 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 SECTM1Q8WVN6 248 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 DUX5Q96PT3 197 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 SDHAF2Q9NX18 166 aa12.86□□□□□ -0.35
CLN6-216ENST00000636876 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 AMY2AP04746 511 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 UBA52P62987 128 aaKnown RBP12.85□□□□□ -0.35
CLN6-216ENST00000636876 LSAMPQ13449 338 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 MSMO1Q15800 293 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 TRIQKQ629K1 86 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 FAAP20Q6NZ36 180 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 FXYD6Q9H0Q3 95 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 VPREB3Q9UKI3 123 aa12.85□□□□□ -0.35
CLN6-216ENST00000636876 IGHV3-72A0A0B4J1Y9 119 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
CLN6-216ENST00000636876 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 IL7P13232 177 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CD24P25063 80 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CD1BP29016 333 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 ZNF846Q147U1 533 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 LHFPL1Q86WI0 220 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CAPSLQ8WWF8 208 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 CHIAQ9BZP6 476 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 WDR12Q9GZL7 423 aaKnown RBP12.84□□□□□ -0.35
CLN6-216ENST00000636876 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 TCF19Q9Y242 345 aa12.84□□□□□ -0.35
CLN6-216ENST00000636876 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
CLN6-216ENST00000636876 A6NDX4 124 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 IGLV2-14P01704 120 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 RNASE1P07998 156 aaKnown RBP12.83□□□□□ -0.36
CLN6-216ENST00000636876 CD40LGP29965 261 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 FAUP35544 74 aaKnown RBP12.83□□□□□ -0.36
CLN6-216ENST00000636876 INPP1P49441 399 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 PPP5CP53041 499 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 LY6EQ16553 131 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 AADACL3Q5VUY0 350 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 ZNF57Q68EA5 555 aaPredicted RBP12.83□□□□□ -0.36
CLN6-216ENST00000636876 DRAXINQ8NBI3 349 aaPredicted RBP12.83□□□□□ -0.36
CLN6-216ENST00000636876 DEDD2Q8WXF8 326 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 CCDC32Q9BV29 185 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
CLN6-216ENST00000636876 H0YJW9 148 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 GPR137BO60478 399 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 FAM106CPP0CH98 169 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 GNRHRP30968 328 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 THBS3P49746 956 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 UCP3P55916 312 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 LINC00205P59089 165 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 SRSF2Q01130 221 aaKnown RBP12.82□□□□□ -0.36
CLN6-216ENST00000636876 EBI3Q14213 229 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 FBLN7Q53RD9 439 aa12.82□□□□□ -0.36
CLN6-216ENST00000636876 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms