RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 WIPI1Q5MNZ9 446 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 Q6P435 159 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF497Q6ZNH5 498 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 DIRC2Q96SL1 478 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 TXNDC17Q9BRA2 123 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 MRPS17Q9Y2R5 130 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 LRRC30A6NM36 301 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 PMS2P5A8MQ11 134 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 IGHV3-9P01782 118 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 ARR3P36575 388 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 PMP22Q01453 160 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 GAGE1Q13065 139 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 KIAA2026Q5HYC2 2103 aa12.49□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A0G2JMM0 328 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A1W2PPB8 328 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A1W2PRS3 328 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 KIR3DP1A8MWS1 328 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 C1QTNF9BB2RNN3 333 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 J3QT63 122 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 LILRA1O75019 489 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 CCL2P13500 99 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 NPPCP23582 126 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 EPHA8P29322 1005 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 PRSS8Q16651 343 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 OR5T1Q8NG75 326 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 OR2Y1Q8NGV0 311 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 RAB1CQ92928 201 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 TBX15Q96SF7 602 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A096LPE4 126 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 LY6G6EA0A0G2JKS1 128 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 A0A1W2PPZ6 126 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 HPRT1P00492 218 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 P0C879 139 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 MPLP40238 635 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 PLP2Q04941 152 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 ANKRD39Q53RE8 183 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 Q8IYB0 196 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 PRRG4Q9BZD6 226 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 U3KQA8 63 aa12.48□□□□□ -0.41
CACNA1A-220ENST00000635988 RFPL3SP0C7P2 107 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 OR3A1P47881 315 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 TPPP2P59282 170 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 TFF3Q07654 80 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 CATR1Q13166 79 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 TMEM106BQ9NUM4 274 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 ELOVL5Q9NYP7 299 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 MDFIC2A0A1B0GVS7 189 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 DLEU1O43261 78 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 NGFP01138 241 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 GNB1P62873 340 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 ZNF705AQ6ZN79 300 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 TCTEX1D1Q8N7M0 179 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 SGMS2Q8NHU3 365 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 SFRP2Q96HF1 295 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 POM121L2Q96KW2 1035 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 MIEN1Q9BRT3 115 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 WIPI2Q9Y4P8 454 aa12.47□□□□□ -0.41
CACNA1A-220ENST00000635988 ODAMA1E959 279 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 TNFSF13O75888 250 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 KRASP01116 189 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 GCH1P30793 250 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 SELENOTP62341 195 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 WFIKKN1Q96NZ8 548 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
CACNA1A-220ENST00000635988 RAC2P15153 192 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 GDF1P27539 372 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 BPIFB3P59826 476 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 CST9LP1Q5W188 147 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.42
CACNA1A-220ENST00000635988 TRAV39A0A0B4J263 110 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 RAB29O14966 203 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 NDUFB4O95168 129 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 OR2H2O95918 312 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 ESDP10768 282 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 KITLGP21583 273 aa12.45□□□□□ -0.42
CACNA1A-220ENST00000635988 G6PCP35575 357 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms