RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ADAD2Q8NCV1 583 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 OR10AG1Q8NH19 301 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 PPCDCQ96CD2 204 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 IL17CQ9P0M4 197 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 SIGLEC7Q9Y286 467 aa3.35□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM262E9PQX1 116 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 F8VVB4 439 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 F8VWA3 439 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM72CH0Y354 149 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 NDUFB8O95169 186 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 RBMXP38159 391 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 TIAL1Q01085 375 aaKnown RBP eCLIP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 ADIGQ0VDE8 80 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM72AQ5TYM5 149 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 RPL7L1Q6DKI1 246 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM72DQ6L9T8 149 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 CDC42EP5Q6NZY7 148 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 HFE2Q6ZVN8 426 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF550Q7Z398 422 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM72BQ86X60 149 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM86AQ8N2M4 240 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR4K1Q8NGD4 311 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR10S1Q8NGN2 331 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR8S1Q8NH09 359 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 IL17DQ8TAD2 202 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC37A2Q8TED4 501 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 IRF7Q92985 503 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 RPEQ96AT9 228 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 SNRNP40Q96DI7 357 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 TVP23CQ96ET8 276 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FAM103A1Q9BTL3 118 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 NDC1Q9BTX1 674 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 RNASE7Q9H1E1 156 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 GPR35Q9HC97 309 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 KCNIP2Q9NS61 270 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 PRSS50Q9UI38 385 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF256Q9Y2P7 627 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 RCL1Q9Y2P8 373 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 LOXL2Q9Y4K0 774 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FNDC1Q4ZHG4 1894 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 DOCK3Q8IZD9 2030 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 TRAV14DV4A0A0A6YYC5 116 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A1W2PP11 408 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 hADV38S2A0JD32 116 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 H3BUT2 72 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 GAPDHSO14556 408 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 NPFFO15130 113 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 IGHA1P01876 353 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 CTSEP14091 401 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 PSMB3P49720 205 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 MEF2CQ06413 473 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 ALG10Q5BKT4 473 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FBXL22Q6P050 247 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 PRSS45Q7RTY3 260 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 DTX1Q86Y01 620 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 VKORC1L1Q8N0U8 176 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2L13Q8N349 312 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2AJ1Q8NGZ0 328 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 OR4K13Q8NH42 304 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 NUS1Q96E22 293 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A21Q9BQT8 299 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 LRRC61Q9BV99 259 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC35B3Q9H1N7 401 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 LHX3Q9UBR4 397 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 FUT9Q9Y231 359 aa3.34□□□□□ -1.87
R3HDM1-220ENST00000628915 TRIP11Q15643 1979 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 NUMA1Q14980 2115 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 RBFOX3A6NFN3 312 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 SH2D1BO14796 132 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 LDB3O75112 727 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 NEURL1O76050 574 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 HBE1P02100 147 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 SELPP16109 830 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 HIST1H1DP16402 221 aaKnown RBP3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 CD33P20138 364 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 SSR2P43308 183 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 SSBP1Q04837 148 aaKnown RBP3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 MPV17LQ2QL34 196 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF791Q3KP31 576 aaPredicted RBP3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 NOXRED1Q6NXP6 359 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 AMIGO3Q86WK7 504 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 LMX1AQ8TE12 382 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 PELI2Q9HAT8 420 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 GPR84Q9NQS5 396 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 PARP11Q9NR21 331 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 SELENOKQ9Y6D0 94 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 ARL2-SNX15V9GYD0 113 aa3.34□□□□□ -1.88
R3HDM1-220ENST00000628915 CASP8AP2Q9UKL3 1982 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 TRBV4-1A0A0J9YWV2 114 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A0J9YY10 115 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1B0GV50 99 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 LOC102725191A0A1B0GVB3 256 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1B0GWB2 263 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1B0GX78 115 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 LCE2BO14633 110 aa3.33□□□□□ -1.88
R3HDM1-220ENST00000628915 PLPP2O43688 288 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms