RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 HRH4Q9H3N8 390 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 PKDREJQ9NTG1 2253 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 KALRNO60229 2985 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 KRASP01116 189 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 CD55P08174 381 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 MMP9P14780 707 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 G6PCP35575 357 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 ID4P47928 161 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF134P52741 427 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 AKR1C1Q04828 323 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 CATR1Q13166 79 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF788Q6ZQV5 615 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 TMEM217Q8N7C4 229 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 LINC01560Q8TB33 94 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 SLC25A31Q9H0C2 315 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 RFNGQ9Y644 331 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 F2RL2O00254 374 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 TNFRSF1AP19438 455 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 ST6GALNAC3Q8NDV1 305 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 LEAP2Q969E1 77 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 SAT2Q96F10 170 aaPredicted RBP16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF665Q9H7R5 613 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 NGBQ9NPG2 151 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 OR6C3Q9NZP0 311 aa16.28■□□□□ 0.2
CHRNA4-209ENST00000627000 IAPPP10997 89 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 DYNLT3P51808 116 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 SRSF3P84103 164 aaKnown RBP16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 MSMO1Q15800 293 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 TEX36Q5VZQ5 186 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 TCF23Q7RTU1 214 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 OR5C1Q8NGR4 320 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 DIRC2Q96SL1 478 aa16.27■□□□□ 0.2
CHRNA4-209ENST00000627000 YPEL1O60688 119 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 SPP1P10451 314 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 CDSNQ15517 529 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 EDARADDQ8WWZ3 215 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 YPEL2Q96QA6 119 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 MS4A7Q9GZW8 240 aaPredicted RBP16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 SAP30LQ9HAJ7 183 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 MMP24Q9Y5R2 645 aa16.27■□□□□ 0.19
CHRNA4-209ENST00000627000 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 RAB19A4D1S5 217 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 SLC31A2O15432 143 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 NDUFA2O43678 99 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 SYNGR2O43760 224 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 CLDN14O95500 239 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 SEC11BP0C7V7 166 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 MUC1P15941 1255 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 GPR12P47775 334 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 FLI1Q01543 452 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 ZNF66Q6ZN08 573 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 CLRN3Q8NCR9 226 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 PLAUP00749 431 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 APOC3P02656 99 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 P0C879 139 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 TMEM267Q0VDI3 215 aaPredicted RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 NCR3LG1Q68D85 454 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 Q6ZRG5 221 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 RNASE6Q93091 150 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 NARS2Q96I59 477 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 KCNJ16Q9NPI9 418 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 MMP26Q9NRE1 261 aa16.26■□□□□ 0.19
CHRNA4-209ENST00000627000 A0A1W2PPE3 182 aa16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 RPL39P5Q59GN2 51 aa16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 RAB40CQ96S21 281 aa16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 HSD17B10Q99714 261 aaKnown RBP16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 IFI27L2Q9H2X8 130 aa16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 NCOR1P1Q9H4R4 102 aa16.25■□□□□ 0.19
CHRNA4-209ENST00000627000 KBTBD11-OT1A0A1B0GTJ5 212 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 TMPRSS2O15393 492 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 TXNL1O43396 289 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 C1QL1O75973 258 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 DUTP33316 252 aaKnown RBP16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 FHITP49789 147 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 RPL23AP62750 156 aaKnown RBP16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 SWI5Q1ZZU3 235 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 TMEM231Q9H6L2 316 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 FAM212BQ9NTI7 297 aaPredicted RBP16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 CLN8Q9UBY8 286 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 CHD8Q9HCK8 2581 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 TRGV10A0A0A0MS01 117 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 LRRC30A6NM36 301 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 CHRNB4P30926 498 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 ADORA2A-AS1P86434 159 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 BAXQ07812 192 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 PJVKQ0ZLH3 352 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 BTNL8Q6UX41 500 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 C1orf229Q6ZS94 237 aaPredicted RBP16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 CCL17Q92583 94 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 FAM234AQ9H0X4 552 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 PRELID3BQ9Y3B1 194 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 NCOR2Q9Y618 2525 aa16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 YLPM1P49750 1951 aaKnown RBP16.24■□□□□ 0.19
CHRNA4-209ENST00000627000 MED19A0JLT2 244 aaPredicted RBP16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 VSTM5A8MXK1 200 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 ARHGDIBP52566 201 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 ZNF266Q14584 549 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 UQCC3Q6UW78 93 aa16.23■□□□□ 0.19
CHRNA4-209ENST00000627000 EGLN1Q9GZT9 426 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms