RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 IFNA1P01562 189 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 IFNA10P01566 189 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 FGF7P21781 194 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 TIPARPQ7Z3E1 657 aaKnown RBP13.31□□□□□ -0.28
NPHP4-211ENST00000622020 ZNF573Q86YE8 665 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 APH1AQ96BI3 265 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 ICE1Q9Y2F5 2266 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 MAP1BP46821 2468 aaKnown RBP13.31□□□□□ -0.28
NPHP4-211ENST00000622020 DEFB108AA8MXU0 73 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 PFN1P07737 140 aaKnown RBP13.31□□□□□ -0.28
NPHP4-211ENST00000622020 PSMB3P49720 205 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 OR2D2Q9H210 308 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 CDH20Q9HBT6 801 aa13.31□□□□□ -0.28
NPHP4-211ENST00000622020 IGHV3-43A0A0B4J1X8 118 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 IGHV3-13P01766 116 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 IGHV3-7P01780 117 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 IGHV3-43DP0DP04 118 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 CD33P20138 364 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
NPHP4-211ENST00000622020 SERF2P84101 59 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 TMEM105Q8N8V8 129 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 OR1L1Q8NH94 360 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 RFESDQ8TAC1 157 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 NXPH2O95156 264 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 CELA3BP08861 270 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 SPCS3P61009 180 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 C21orf62-AS1Q17RA5 79 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
NPHP4-211ENST00000622020 TDHQ8IZJ6 230 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 OR52L2PQ8NGH6 319 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 TMEM242Q9NWH2 141 aa13.3□□□□□ -0.28
NPHP4-211ENST00000622020 OR3A1P47881 315 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 WDR86Q86TI4 376 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 MCEMP1Q8IX19 187 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 SAXO1Q8IYX7 474 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 RIMS4Q9H426 269 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 SRD5A3Q9H8P0 318 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 PILRBQ9UKJ0 227 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 KBTBD11O94819 623 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 SYNGR4O95473 234 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 TNFRSF9Q07011 255 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 CST9LP1Q5W188 147 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 RAB24Q969Q5 203 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 DERL1Q9BUN8 251 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 EREGO14944 169 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 LHX2P50458 406 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 JOSD1Q15040 202 aaPredicted RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 WDYHV1Q96HA8 205 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 P2RX4Q99571 388 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 FAM234AQ9H0X4 552 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 OR51I2Q9H344 312 aa13.29□□□□□ -0.28
NPHP4-211ENST00000622020 LIN7CQ9NUP9 197 aaKnown RBP13.29□□□□□ -0.28
NPHP4-211ENST00000622020 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 WNT9BO14905 357 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 S1PR2O95136 353 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 GYPAP02724 150 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 OR4A8P0C604 315 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 AESQ08117 197 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 FAM78BQ5VT40 261 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 Q6P435 159 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 CT55Q8WUE5 264 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 LSM10Q969L4 123 aaKnown RBP13.28□□□□□ -0.28
NPHP4-211ENST00000622020 OR2J1Q9GZK6 312 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 CLDN18P56856 261 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 SRSF7Q16629 238 aaKnown RBP eCLIP13.28□□□□□ -0.28
NPHP4-211ENST00000622020 PINX1Q96BK5 328 aaKnown RBP13.28□□□□□ -0.28
NPHP4-211ENST00000622020 C2orf88Q9BSF0 95 aa13.28□□□□□ -0.28
NPHP4-211ENST00000622020 NUBP1P53384 320 aa13.27□□□□□ -0.28
NPHP4-211ENST00000622020 MDP1Q86V88 176 aa13.27□□□□□ -0.28
NPHP4-211ENST00000622020 OR2M7Q8NG81 312 aa13.27□□□□□ -0.28
NPHP4-211ENST00000622020 CTDSP1Q9GZU7 261 aa13.27□□□□□ -0.28
NPHP4-211ENST00000622020 BOKQ9UMX3 212 aaPredicted RBP13.27□□□□□ -0.28
NPHP4-211ENST00000622020 SPENQ96T58 3664 aaKnown RBP13.27□□□□□ -0.29
NPHP4-211ENST00000622020 ODAMA1E959 279 aa13.27□□□□□ -0.29
NPHP4-211ENST00000622020 C17orf98A8MV24 154 aa13.27□□□□□ -0.29
NPHP4-211ENST00000622020 PSPNO60542 156 aa13.27□□□□□ -0.29
NPHP4-211ENST00000622020 NEU1Q99519 415 aa13.27□□□□□ -0.29
NPHP4-211ENST00000622020 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
NPHP4-211ENST00000622020 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
NPHP4-211ENST00000622020 MPLP40238 635 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 EDDM3BP56851 147 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 PATZ1Q9HBE1 687 aaKnown RBP13.26□□□□□ -0.29
NPHP4-211ENST00000622020 NEURL1O76050 574 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 SCGB1D1O95968 90 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 NPPCP23582 126 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 MRGPRDQ8TDS7 321 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 A8MWP6 167 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
NPHP4-211ENST00000622020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms