RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 PRSS57Q6UWY2 283 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 LIAT1Q6ZQX7 453 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF833PQ6ZTB9 187 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 VMO1Q7Z5L0 202 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 PNKDQ8N490 385 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 OR5M8Q8NGP6 311 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 OR10X1Q8NGY0 326 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 LHFPL5Q8TAF8 219 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 GLYATL2Q8WU03 294 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 TCTEX1D2Q8WW35 142 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 TNFRSF14Q92956 283 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 MSI2Q96DH6 328 aaKnown RBP8.69□□□□□ -1.02
CPNE3-212ENST00000621783 ST6GAL2Q96JF0 529 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 TMEM222Q9H0R3 208 aa8.69□□□□□ -1.02
CPNE3-212ENST00000621783 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
CPNE3-212ENST00000621783 UTP20O75691 2785 aaKnown RBP8.69□□□□□ -1.02
CPNE3-212ENST00000621783 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
CPNE3-212ENST00000621783 LINC00473A8K010 186 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 TOR1AO14656 332 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 ADAP1O75689 374 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 B3GALNT1O75752 331 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 SIX6O95475 246 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 MMP9P14780 707 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF137PP52743 207 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 LINC00205P59089 165 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 SRPXP78539 464 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 HLA-DRB5Q30154 266 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 OR2B11Q5JQS5 317 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 DCAF12L2Q5VW00 463 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 HCP5Q6MZN7 132 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 C1orf122Q6ZSJ8 110 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 LGI3Q8N145 548 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 BEND2Q8NDZ0 799 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 OR13D1Q8NGV5 346 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 Q96MF0 132 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 FYTTD1Q96QD9 318 aaKnown RBP8.68□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF436Q9C0F3 470 aaPredicted RBP8.68□□□□□ -1.02
CPNE3-212ENST00000621783 RAB18Q9NP72 206 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 INSIG2Q9Y5U4 225 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 MALRD1Q5VYJ5 2156 aa8.68□□□□□ -1.02
CPNE3-212ENST00000621783 ODF3BA8MYP8 253 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 RNF223E7ERA6 249 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TOX4O94842 621 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 MSMBP08118 114 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 HOXB5P09067 269 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 GIPP09681 153 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 HLA-GP17693 338 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 IL3RAP26951 378 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 THBS3P49746 956 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 PRRX1P54821 245 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 H2BFSP57053 126 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 AKAP6Q13023 2319 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TMEM268Q5VZI3 342 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 NCR3LG1Q68D85 454 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 FAM71F2Q6NXP2 309 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF695Q8IW36 515 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 SELENOHQ8IZQ5 122 aaKnown RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 SLC35G3Q8N808 338 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 DRAXINQ8NBI3 349 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 OR11H6Q8NGC7 330 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 OR4P4Q8NGL7 312 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 DDB2Q92466 427 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 IL22RA2Q969J5 263 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 ST6GALNAC6Q969X2 333 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 C18orf12Q96KH6 178 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TMEM56Q96MV1 263 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TBX15Q96SF7 602 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 S1PR3Q99500 378 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 REG4Q9BYZ8 158 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 CHIAQ9BZP6 476 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 UNKLQ9H9P5 680 aaKnown RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 AMMECR1Q9Y4X0 333 aaPredicted RBP8.67□□□□□ -1.02
CPNE3-212ENST00000621783 TMEM56-RWDD3S4R434 201 aa8.67□□□□□ -1.02
CPNE3-212ENST00000621783 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 FAM25EA8MYX2 175 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 RNASEK-C17orf49H0YIS7 233 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 BOLA2-SMG1P6H3BVE0 249 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 RAMP3O60896 148 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 S1PR2O95136 353 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 CDS2O95674 445 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 IGKV1-39P01597 117 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 IGKV1D-39P04432 117 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 ARG1P05089 322 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 SERPINE2P07093 398 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 KIR2DS2P43631 304 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 REG1BP48304 166 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 BRWD1-AS2P59051 145 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 PAX8Q06710 450 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 ZNF816Q0VGE8 651 aaPredicted RBP8.66□□□□□ -1.02
CPNE3-212ENST00000621783 DIAPH2-AS1Q14236 149 aa8.66□□□□□ -1.02
CPNE3-212ENST00000621783 GGNBP1Q5YKI7 109 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms