RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 GNG12Q9UBI6 72 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 TBC1D24Q9ULP9 559 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 ING4Q9UNL4 249 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 ST3GAL6Q9Y274 331 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 WASHC3Q9Y3C0 194 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 PUS1Q9Y606 427 aaKnown RBP eCLIP1.66□□□□□ -2.14
CPNE3-211ENST00000621526 R4GMQ9 66 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 FAT3Q8TDW7 4589 aa1.66□□□□□ -2.14
CPNE3-211ENST00000621526 TRBV5-7A0A0A0MS05 114 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV3-43A0A0B4J1X8 118 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV2A0A0B4J234 112 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV39A0A0B4J263 110 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PPP5D1E7EU14 171 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 H0YJW9 148 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 H7C2Y5 167 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 K7EP13 123 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 NDUFAB1O14561 156 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CCDC22O60826 627 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PROP1O75360 226 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GPX5O75715 221 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 S1PR2O95136 353 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GADD45GO95257 159 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SOX14O95416 240 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GASTP01350 101 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HLA-AP01891 365 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HBZP02008 142 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HMGN1P05114 100 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ISG15P05161 165 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CRYGCP07315 174 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CTSDP07339 412 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 RPSAP08865 295 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 IGHV3-43DP0DP04 118 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM225BP0DP42 221 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HIST1H1BP16401 226 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GNB3P16520 340 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF3P17036 446 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 RRM2P31350 389 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ARL3P36405 182 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HOXA1P49639 335 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 NUDT2P50583 147 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SNU13P55769 128 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ERVFC1-1P60608 527 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PJVKQ0ZLH3 352 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 EXOSC2Q13868 293 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PRSS8Q16651 343 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 LRRC23Q53EV4 343 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 C6orf183Q5T699 404 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SYT6Q5T7P8 510 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 LCE2AQ5TA79 106 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 LCE2DQ5TA82 110 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 BCL2L15Q5TBC7 163 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM244Q5VVB8 128 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 FAM90A2PQ658T7 463 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CLEC19AQ6UXS0 136 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HACD2Q6Y1H2 254 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF497Q6ZNH5 498 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 BCDIN3DQ7Z5W3 292 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 NFE4Q86UQ8 179 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PDPNQ86YL7 162 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CPOQ8IVL8 374 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 PRSS35Q8N3Z0 413 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 STX19Q8N4C7 294 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TCEANCQ8N8B7 351 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TEX45Q8NA69 505 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SUMF2Q8NBJ7 301 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 DUSP18Q8NEJ0 188 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GRPEL2Q8TAA5 225 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GALMQ96C23 342 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 HSH2DQ96JZ2 352 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CXorf58Q96LI9 332 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 OPALINQ96PE5 141 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SPIN2AQ99865 258 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SPIN2BQ9BPZ2 258 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 NIPSNAP3BQ9BS92 247 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 AGMATQ9BSE5 352 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 UPK3BQ9BT76 320 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ABHD14AQ9BUJ0 271 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 C1QTNF4Q9BXJ3 329 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF436Q9C0F3 470 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 OR51V1Q9H2C8 321 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 FNDC4Q9H6D8 234 aaPredicted RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SPACA1Q9HBV2 294 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 DAZ1Q9NQZ3 744 aaKnown RBP1.65□□□□□ -2.15
CPNE3-211ENST00000621526 MRGBPQ9NV56 204 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 ARL8BQ9NVJ2 186 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 GID8Q9NWU2 228 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 KCNIP1Q9NZI2 227 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 DKK2Q9UBU2 259 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 SMPXQ9UHP9 88 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 JPT1Q9UK76 154 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 TRAPPC2LQ9UL33 140 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 CELA1Q9UNI1 258 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 LINC00588Q9Y4M8 146 aa1.65□□□□□ -2.15
CPNE3-211ENST00000621526 A0A087WTM6 91 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SAA2-SAA4A0A096LPE2 208 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 C15orf62A8K5M9 175 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 NPIPB5A8MRT5 1133 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 MCRIP1C9JLW8 97 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 FXYD1O00168 92 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms