RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 FAM90A22PA8MWA6 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A12PA8MX19 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A5PA8MXJ8 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A23PA8MXZ1 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 IGLV3-19P01714 112 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A15PP0C7V4 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A13PP0C7W8 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A14PP0C7W9 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM90A24PP0C7X0 464 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FCGR2BP31994 310 aaPredicted RBP9.76□□□□□ -0.85
CLIP1-219ENST00000620786 IRF3Q14653 427 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 RBKSQ9H477 322 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 KCNE5Q9UJ90 142 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 PXMP4Q9Y6I8 212 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 ZNFX1Q9P2E3 1918 aaKnown RBP9.76□□□□□ -0.85
CLIP1-219ENST00000620786 TMEM186Q96B77 213 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 MRPS18AQ9NVS2 196 aaKnown RBP9.76□□□□□ -0.85
CLIP1-219ENST00000620786 FAM206AQ9NX38 181 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 A0A1W2PP11 408 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 IGHMP01871 453 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 IL36RNQ9UBH0 155 aa9.76□□□□□ -0.85
CLIP1-219ENST00000620786 A0A0G2JMM0 328 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 CTXND1A0A1B0GTU2 59 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 A0A1W2PPB8 328 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 A0A1W2PRS3 328 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 KIR3DP1A8MWS1 328 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 CD1AP06126 327 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 LINC00869P0C866 280 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 GLIPR1P48060 266 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 TNFSF10P50591 281 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 FXYD3Q14802 87 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 SPACA3Q8IXA5 215 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 OR2D3Q8NGH3 330 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 SIRT4Q9Y6E7 314 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-219ENST00000620786 TRAV30A0A087WSZ9 112 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 PLAUP00749 431 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 CCKARP32238 428 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 C19orf54Q5BKX5 351 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 CHRNA10Q9GZZ6 450 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 PTPRZ1P23471 2315 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-219ENST00000620786 IGKV3-11P04433 115 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 PSMB2P49721 201 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 RELQ04864 619 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-219ENST00000620786 LRRC75AQ8NAA5 344 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 MEGF10Q96KG7 1140 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 LURAP1Q96LR2 239 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 PLXNA1Q9UIW2 1896 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 NPIPB11E5RHQ5 1161 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 OR2A4O95047 310 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 ISG15P05161 165 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 FAM24BQ8N5W8 94 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 CTHRC1Q96CG8 243 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 OR2A7Q96R45 310 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 GSX1Q9H4S2 264 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-219ENST00000620786 RND2P52198 227 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 ELOVL1Q9BW60 279 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 TOLLIPQ9H0E2 274 aa9.75□□□□□ -0.85
CLIP1-219ENST00000620786 C17orf51A8MQB3 221 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 J3QR89 54 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 TGFAP01135 160 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 CDKN1AP38936 164 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-219ENST00000620786 AKIRIN1Q9H9L7 192 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-219ENST00000620786 GP6Q9HCN6 339 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 IGKV1D-42A0A075B6H8 117 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PTGDSP41222 190 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 HLA-DRB5Q30154 266 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 OR5P3Q8WZ94 311 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 VWCEQ96DN2 955 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PHOX2AO14813 284 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-219ENST00000620786 CECR9P0C854 216 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 GLRXP35754 106 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 APCDD1LQ8NCL9 501 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 MAP1LC3CQ9BXW4 147 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 ISLRO14498 428 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 MAS1LP35410 378 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 OR4C13Q8NGP0 309 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 ZNF418Q8TF45 676 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-219ENST00000620786 RTN4RQ9BZR6 473 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 A0A1W2PRX2 142 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 TRGV3P03979 118 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 PSG9Q00887 426 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 IQCJQ1A5X6 159 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 SCMH1Q96GD3 660 aa9.74□□□□□ -0.85
CLIP1-219ENST00000620786 RHOVQ96L33 236 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms