RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SIGLEC9Q9Y336 463 aa13.04□□□□□ -0.32
CD40-207ENST00000620709 TRAV39A0A0B4J263 110 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 hCG_1809904A0A1W2PP81 198 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 A0A1W2PR64 198 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 A0A1W2PRV1 198 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 BET1O15155 118 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 DIRAS3O95661 229 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 OR4E1P0C645 316 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 GLIPR1P48060 266 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 C4orf46Q504U0 113 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 ZNF626Q68DY1 528 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 SLC25A42Q86VD7 318 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 FXYD6Q9H0Q3 95 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 NCOR1P1Q9H4R4 102 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 TAF9BQ9HBM6 251 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 NOTCH1P46531 2555 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 TGP01266 2768 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 SSNA1O43805 119 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 TSPAN9O75954 239 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 TSPAN15O95858 294 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 PPYP01298 95 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 NFYAP23511 347 aaPredicted RBP13.03□□□□□ -0.32
CD40-207ENST00000620709 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
CD40-207ENST00000620709 UBE2MP61081 183 aaKnown RBP13.03□□□□□ -0.32
CD40-207ENST00000620709 ZNF273Q14593 569 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 OR10J5Q8NHC4 309 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 ZFAND1Q8TCF1 268 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
CD40-207ENST00000620709 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
CD40-207ENST00000620709 TRBV6-7A0A0A0MS04 114 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 ODAMA1E959 279 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 FAM172BPA6NC97 362 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 CCNKO75909 580 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 ZNF728P0DKX0 622 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 AADACP22760 399 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 P2RX3P56373 397 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 EDDM3BP56851 147 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 TPRX1Q8N7U7 411 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 OR4C13Q8NGP0 309 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 MRGPRDQ8TDS7 321 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 ZNF431Q8TF32 576 aaPredicted RBP13.02□□□□□ -0.33
CD40-207ENST00000620709 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 C5orf66Q9H5L9 145 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 ZNF221Q9UK13 617 aa13.02□□□□□ -0.33
CD40-207ENST00000620709 C12orf77C9JDV5 145 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 TUSC2O75896 110 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 CTSDP07339 412 aaPredicted RBP13.01□□□□□ -0.33
CD40-207ENST00000620709 UCP3P55916 312 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 FXYD4P59646 89 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 TMEM128Q5BJH2 165 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 C5orf24Q7Z6I8 188 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 PRR18Q8N4B5 295 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 OR52B4Q8NGK2 314 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 OR13A1Q8NGR1 328 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 IL1F10Q8WWZ1 152 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 TOMM40LQ969M1 308 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 OR6C3Q9NZP0 311 aa13.01□□□□□ -0.33
CD40-207ENST00000620709 HLA-AP01891 365 aaKnown RBP13□□□□□ -0.33
CD40-207ENST00000620709 ARG1P05089 322 aa13□□□□□ -0.33
CD40-207ENST00000620709 AKR1C4P17516 323 aa13□□□□□ -0.33
CD40-207ENST00000620709 DHRS2Q13268 280 aa13□□□□□ -0.33
CD40-207ENST00000620709 C2orf68Q2NKX9 166 aa13□□□□□ -0.33
CD40-207ENST00000620709 LHFPL4Q7Z7J7 247 aa13□□□□□ -0.33
CD40-207ENST00000620709 LYG2Q86SG7 212 aa13□□□□□ -0.33
CD40-207ENST00000620709 C1QL4Q86Z23 238 aa13□□□□□ -0.33
CD40-207ENST00000620709 H1FOOQ8IZA3 346 aaPredicted RBP13□□□□□ -0.33
CD40-207ENST00000620709 SLC38A6Q8IZM9 456 aa13□□□□□ -0.33
CD40-207ENST00000620709 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
CD40-207ENST00000620709 ADAD2Q8NCV1 583 aaKnown RBP13□□□□□ -0.33
CD40-207ENST00000620709 GALMQ96C23 342 aa13□□□□□ -0.33
CD40-207ENST00000620709 AJUBAQ96IF1 538 aa13□□□□□ -0.33
CD40-207ENST00000620709 RTBDNQ9BSG5 229 aaPredicted RBP13□□□□□ -0.33
CD40-207ENST00000620709 MEGF9Q9H1U4 602 aa13□□□□□ -0.33
CD40-207ENST00000620709 SLC23A1Q9UHI7 598 aa13□□□□□ -0.33
CD40-207ENST00000620709 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
CD40-207ENST00000620709 SPINT2O43291 252 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 HSPA12AO43301 675 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 HBZP02008 142 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
CD40-207ENST00000620709 PI3P19957 117 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 GZMHP20718 246 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 ZBTB25P24278 435 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 PPP1R1AQ13522 171 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 FCN2Q15485 313 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 LPCAT3Q6P1A2 487 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 C11orf42Q8N5U0 333 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 OR1L1Q8NH94 360 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 TMEM230Q96A57 120 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 RAB18Q9NP72 206 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 RAB9BQ9NP90 201 aa12.99□□□□□ -0.33
CD40-207ENST00000620709 SULT1A3P0DMM9 295 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms