RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RAMP3O60896 148 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.02
TARDBP-221ENST00000619555 VDAC1P21796 283 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 ECI1P42126 302 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 SERPINB10P48595 397 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 LSAMPQ13449 338 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 DCTN2Q13561 401 aaKnown RBP8.71□□□□□ -1.02
TARDBP-221ENST00000619555 C9orf66Q5T8R8 295 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 OR52L2PQ8NGH6 319 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 RAB3CQ96E17 227 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 KLK15Q9H2R5 256 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 RAB9BQ9NP90 201 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 OR2S2Q9NQN1 319 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF107Q9UII5 783 aaPredicted RBP8.71□□□□□ -1.02
TARDBP-221ENST00000619555 SCOCQ9UIL1 159 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 WSB1Q9Y6I7 421 aa8.71□□□□□ -1.02
TARDBP-221ENST00000619555 A0A075B6Q4 140 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 TRBV6-6A0A0A6YYG2 114 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 G3V318 75 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 LANCL1O43813 399 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 IGF1P05019 195 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 CNTFRP26992 372 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 PSMB8P28062 276 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 PPP1CCP36873 323 aaKnown RBP8.7□□□□□ -1.02
TARDBP-221ENST00000619555 RANBP1P43487 201 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 FHL3Q13643 280 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 KIAA0141Q14154 515 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-221ENST00000619555 MMDQ15546 238 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 TMEM30BQ3MIR4 351 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 MORN2Q502X0 79 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 STEAP3Q658P3 488 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 GPR141Q7Z602 305 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 SETD6Q8TBK2 473 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 C4orf3Q8WVX3 66 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 SLC25A46Q96AG3 418 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 ASCL2Q99929 193 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 CMSS1Q9BQ75 279 aaKnown RBP8.7□□□□□ -1.02
TARDBP-221ENST00000619555 GNB4Q9HAV0 340 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 CHMP1AQ9HD42 196 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-221ENST00000619555 Q9N2K0 584 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 RHBDL2Q9NX52 303 aa8.7□□□□□ -1.02
TARDBP-221ENST00000619555 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 SCTP09683 121 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 NHLRC4P0CG21 123 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-221ENST00000619555 PPIFP30405 207 aaKnown RBP8.69□□□□□ -1.02
TARDBP-221ENST00000619555 OR3A3P47888 321 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 SCAND1P57086 179 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ACTBP60709 375 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 HLA-DRB3P79483 266 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF260Q3ZCT1 412 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 TRAT1Q6PIZ9 186 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF554Q86TJ5 538 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ODF3L1Q8IXM7 274 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 MYOZ3Q8TDC0 251 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 MAFIPQ8WZ33 124 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 OR5B12Q96R08 314 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 NABP2Q9BQ15 211 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ABHD14AQ9BUJ0 271 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 MRPL20Q9BYC9 149 aaKnown RBP8.69□□□□□ -1.02
TARDBP-221ENST00000619555 PARP12Q9H0J9 701 aaKnown RBP8.69□□□□□ -1.02
TARDBP-221ENST00000619555 C12orf4Q9NQ89 552 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 KCNIP1Q9NZI2 227 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF230Q9UIE0 474 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF580Q9UK33 172 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 SPATA2Q9UM82 520 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 ETV7Q9Y603 341 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 U3KQK5 164 aa8.69□□□□□ -1.02
TARDBP-221ENST00000619555 IGKV1D-8A0A087WSZ0 117 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 IGKV1-6A0A0C4DH72 117 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 METTL21EPA6NDL7 271 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 TMEM235A6NFC5 223 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 FCGR3AP08637 254 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 OR5H8P0DN80 308 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 SPCS2Q15005 226 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 CDNFQ49AH0 187 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 MOB1BQ7L9L4 216 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 CLVS1Q8IUQ0 354 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-221ENST00000619555 ZNF491Q8N8L2 437 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 OR1N2Q8NGR9 330 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 OR51J1Q9H342 316 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 RIMS4Q9H426 269 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-221ENST00000619555 PARP11Q9NR21 331 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 ABRACLQ9P1F3 81 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 OR1A1Q9P1Q5 309 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 JPT1Q9UK76 154 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 RYR2Q92736 4967 aa8.68□□□□□ -1.02
TARDBP-221ENST00000619555 IGHV7-81A0A0B4J1V7 117 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 I3L521 148 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 SSX5O60225 188 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 YPEL1O60688 119 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 HLA-DRB1P01911 266 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 CD3GP09693 182 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 PTHLHP12272 177 aa8.67□□□□□ -1.02
TARDBP-221ENST00000619555 RPL5P46777 297 aaKnown RBP8.67□□□□□ -1.02
TARDBP-221ENST00000619555 GNB1P62873 340 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms