RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC16A13Q7RTY0 426 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 DOLPP1Q86YN1 238 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 ODF3L1Q8IXM7 274 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 OR2G3Q8NGZ4 309 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 FAM57AQ8TBR7 257 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 LEAP2Q969E1 77 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 MRPL37Q9BZE1 423 aaKnown RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 LYRM2Q9NU23 88 aaPredicted RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 NDRG3Q9UGV2 375 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 IGKV1D-17A0A075B6S4 117 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 A8MXE2 369 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 PRRG2O14669 202 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 RBMXL2O75526 392 aaKnown RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 METTL15P1P0C7V9 234 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 ATP6V0CP27449 155 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 TAS2R60P59551 318 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 TCTEX1D2Q8WW35 142 aa10.38□□□□□ -0.75
CIITA-212ENST00000618207 SAT2Q96F10 170 aaPredicted RBP10.38□□□□□ -0.75
CIITA-212ENST00000618207 DYSFO75923 2080 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 A0A0G2JNJ9 132 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 A0A1W2PPE3 182 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 RNASEK-C17orf49H0YIS7 233 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 S100A8P05109 93 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SPP1P10451 314 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 LMO1P25800 156 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 PAX9P55771 341 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 RAB4BP61018 213 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SLC35E4Q6ICL7 350 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 FGFRL1Q8N441 504 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
CIITA-212ENST00000618207 GNG12Q9UBI6 72 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 Q9UFV3 132 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 DMRT1Q9Y5R6 373 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 LRBAP50851 2863 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SLC31A2O15432 143 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 CYB5R3P00387 301 aaPredicted RBP10.37□□□□□ -0.75
CIITA-212ENST00000618207 TIMP3P35625 211 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 F2RL1P55085 397 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SPANXN5Q5MJ07 72 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 UQCC3Q6UW78 93 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 BTNL8Q6UX41 500 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 CBLN2Q8IUK8 224 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 AKR1E2Q96JD6 320 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 SLC25A31Q9H0C2 315 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 LIN7CQ9NUP9 197 aaKnown RBP10.37□□□□□ -0.75
CIITA-212ENST00000618207 FBXO7Q9Y3I1 522 aa10.37□□□□□ -0.75
CIITA-212ENST00000618207 C17orf98A8MV24 154 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 SFTA3P0C7M3 94 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 PLA2G5P39877 138 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 AKR1C3P42330 323 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 CCL8P80075 99 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 DEFA6Q01524 100 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 UTF1Q5T230 341 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 CYB5R2Q6BCY4 276 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 SPAG16Q8N0X2 631 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 Q8NA96 180 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 MEGF10Q96KG7 1140 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 LURAP1Q96LR2 239 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 NEU1Q99519 415 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 GINS3Q9BRX5 216 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 RNF115Q9Y4L5 304 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 S1PR2O95136 353 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 SEC11BP0C7V7 166 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 NFYBP25208 207 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 CCKARP32238 428 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 GLRXP35754 106 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 NPBWR1P48145 328 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 CEBPGP53567 150 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 IL34Q6ZMJ4 242 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 CACFD1Q9UGQ2 172 aa10.36□□□□□ -0.75
CIITA-212ENST00000618207 SRRM5B3KS81 715 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 NPIPB11E5RHQ5 1161 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 DANCRP0C864 163 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 KRTCAP3Q53RY4 240 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 ETV3LQ6ZN32 361 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 ZNF295-AS1Q8N0V1 137 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 SNRNP40Q96DI7 357 aaKnown RBP10.35□□□□□ -0.75
CIITA-212ENST00000618207 SFXN3Q9BWM7 321 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 KCNJ16Q9NPI9 418 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 PARP11Q9NR21 331 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 A0A1B0GU03 582 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 SYNGR2O43760 224 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 CLDN1O95832 211 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 CD40P25942 277 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 CEACAM8P31997 349 aaPredicted RBP10.35□□□□□ -0.75
CIITA-212ENST00000618207 ZNF266Q14584 549 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 HFEQ30201 348 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 SVBPQ8N300 66 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 RSG1Q9BU20 258 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 PSENENQ9NZ42 101 aa10.35□□□□□ -0.75
CIITA-212ENST00000618207 DUXBA0A1W2PPF3 345 aa10.34□□□□□ -0.75
CIITA-212ENST00000618207 LINC00473A8K010 186 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms