RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TMPRSS2O15393 492 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 SIAH2O43255 324 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 YPEL1O60688 119 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 S1PR2O95136 353 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 GPR12P47775 334 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 MST1LQ2TV78 715 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 ODF3L1Q8IXM7 274 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 LRRC20Q8TCA0 184 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 CCL17Q92583 94 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 LEAP2Q969E1 77 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 LINC00052Q96N35 136 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 YPEL2Q96QA6 119 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 PLA2G2EQ9NZK7 142 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 TRGV10A0A0A0MS01 117 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF705EA8MWA4 302 aaPredicted RBP14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 CLDN14O95500 239 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 MMP9P14780 707 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 APOBEC3AP31941 199 aaPredicted RBP14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 G6PCP35575 357 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF134P52741 427 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 EIF5AL1Q6IS14 154 aaKnown RBP14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF295-AS1Q8N0V1 137 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 FAM234AQ9H0X4 552 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 ARV1Q9H2C2 271 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 TAS2R3Q9NYW6 316 aa14.36□□□□□ -0.11
PCDHGC3-205ENST00000617641 NBASA2RRP1 2371 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 BORCS7-ASMTA0A0B4J1R7 106 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 KBTBD11-OT1A0A1B0GTJ5 212 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 TMEM178BH3BS89 294 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 PROP1O75360 226 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 KRASP01116 189 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 CLINT1Q14677 625 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 ZNF66Q6ZN08 573 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 SLC25A31Q9H0C2 315 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 LPAR3Q9UBY5 353 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 CLN8Q9UBY8 286 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 TRAV38-1A0A0B4J264 116 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 NKX6-3A6NJ46 265 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 SLC31A2O15432 143 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 CST7O76096 145 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 EIF4E3Q8N5X7 224 aaKnown RBP14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 CA5BP1Q8WTZ4 195 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 HSD17B10Q99714 261 aaKnown RBP14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 TMEM106BQ9NUM4 274 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 MMP24Q9Y5R2 645 aa14.35□□□□□ -0.11
PCDHGC3-205ENST00000617641 PIEZO1Q92508 2521 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 H3BP45 60 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 NDUFB7P17568 137 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 B2MP61769 119 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 CCDC28AQ8IWP9 274 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 C1orf87Q8N0U7 546 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 IFI27L2Q9H2X8 130 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 CISD1Q9NZ45 108 aaKnown RBP14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 ITPR1Q14643 2758 aa14.34□□□□□ -0.11
PCDHGC3-205ENST00000617641 PPIAL4EA0A075B759 164 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 A0A1W2PPE3 182 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 PPIAL4DF5H284 164 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 PPIAL4FP0DN26 164 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 IAPPP10997 89 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 SULT1A2P50226 295 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 SWI5Q1ZZU3 235 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 RPL39P5Q59GN2 51 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 NCR3LG1Q68D85 454 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 LURAP1LQ8IV03 231 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 TMEM217Q8N7C4 229 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 MS4A5Q9H3V2 200 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 GFOD1Q9NXC2 390 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 PPIAL4AQ9Y536 164 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 COL6A6A6NMZ7 2263 aa14.33□□□□□ -0.11
PCDHGC3-205ENST00000617641 SYNGR2O43760 224 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 MED6O75586 246 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 P0C879 139 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 ZP3P21754 424 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 DUTP33316 252 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 EFNB3Q15768 340 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 HSD17B11Q8NBQ5 300 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 GINS3Q9BRX5 216 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 ARFGEF3Q5TH69 2177 aa14.33□□□□□ -0.12
PCDHGC3-205ENST00000617641 B9A039 149 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 M0R1X1 148 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 NFYBP25208 207 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 DYNLT3P51808 116 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 TCTEX1D1Q8N7M0 179 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 OR5C1Q8NGR4 320 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 MARC2Q969Z3 335 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 RAB40CQ96S21 281 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 SH3BGRL3Q9H299 93 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 RAB9BQ9NP90 201 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 KCNJ16Q9NPI9 418 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 SLC25A10Q9UBX3 287 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 FCN3O75636 299 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 MMP23AO75900 390 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 SFTPCP11686 197 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 RPL23AP62750 156 aaKnown RBP14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 PXDC1Q5TGL8 231 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 SMIM8Q96KF7 97 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 ABHD14AQ9BUJ0 271 aa14.32□□□□□ -0.12
PCDHGC3-205ENST00000617641 SHOXO15266 292 aa14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 TMEM267Q0VDI3 215 aaPredicted RBP14.31□□□□□ -0.12
PCDHGC3-205ENST00000617641 CT45A1Q5HYN5 189 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms