RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 RPS27P42677 84 aaKnown RBP7□□□□□ -1.29
GPC6-202ENST00000617456 ZNF121P58317 390 aaPredicted RBP7□□□□□ -1.29
GPC6-202ENST00000617456 PRB3Q04118 309 aaPredicted RBP7□□□□□ -1.29
GPC6-202ENST00000617456 HMGN3Q15651 99 aa7□□□□□ -1.29
GPC6-202ENST00000617456 NKAPLQ5M9Q1 402 aa7□□□□□ -1.29
GPC6-202ENST00000617456 KPRPQ5T749 579 aaPredicted RBP7□□□□□ -1.29
GPC6-202ENST00000617456 SFRP4Q6FHJ7 346 aaPredicted RBP7□□□□□ -1.29
GPC6-202ENST00000617456 OR52W1Q6IF63 320 aa7□□□□□ -1.29
GPC6-202ENST00000617456 WDR82Q6UXN9 313 aa7□□□□□ -1.29
GPC6-202ENST00000617456 LIAT1Q6ZQX7 453 aa7□□□□□ -1.29
GPC6-202ENST00000617456 Q6ZTK2 550 aa7□□□□□ -1.29
GPC6-202ENST00000617456 TMEM144Q7Z5S9 345 aa7□□□□□ -1.29
GPC6-202ENST00000617456 FAM90A1Q86YD7 464 aa7□□□□□ -1.29
GPC6-202ENST00000617456 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
GPC6-202ENST00000617456 CMTM4Q8IZR5 234 aa7□□□□□ -1.29
GPC6-202ENST00000617456 NHLRC2Q8NBF2 726 aa7□□□□□ -1.29
GPC6-202ENST00000617456 OR6N2Q8NGY6 317 aa7□□□□□ -1.29
GPC6-202ENST00000617456 C8orf46Q8TAG6 207 aa7□□□□□ -1.29
GPC6-202ENST00000617456 GINS4Q9BRT9 223 aa7□□□□□ -1.29
GPC6-202ENST00000617456 NICN1Q9BSH3 213 aa7□□□□□ -1.29
GPC6-202ENST00000617456 RTL8AQ9BWD3 113 aa7□□□□□ -1.29
GPC6-202ENST00000617456 DPAGT1Q9H3H5 408 aa7□□□□□ -1.29
GPC6-202ENST00000617456 AURKAIP1Q9NWT8 199 aaPredicted RBP7□□□□□ -1.29
GPC6-202ENST00000617456 CTSZQ9UBR2 303 aa7□□□□□ -1.29
GPC6-202ENST00000617456 FAM96BQ9Y3D0 163 aa7□□□□□ -1.29
GPC6-202ENST00000617456 KIR2DL5BA0A0G2JN68 375 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 KIR2DL5BA0A0G2JPC4 375 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 A0A1W2PRD5 423 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 A0A1W2PRF3 423 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 A0A1W2PRM7 423 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 ANKRD61A6NGH8 418 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 FAM183AA6NL82 134 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 CCL25O15444 150 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 LYRM1O43325 122 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 MMP23AO75900 390 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 RGS11O94810 467 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 HPRT1P00492 218 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 GRPP07492 148 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 VSIG8P0DPA2 414 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 RAB5AP20339 215 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 LGALS7P47929 136 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 CRYBA4P53673 196 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 CRISP1P54107 249 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 LOXL3P58215 753 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 EFNB1P98172 346 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 PPP1R8Q12972 351 aaKnown RBP6.99□□□□□ -1.29
GPC6-202ENST00000617456 TPBGQ13641 420 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 HERPUD1Q15011 391 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 FAHD1Q6P587 224 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 LYPD4Q6UWN0 246 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 AHSA2Q719I0 299 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 FAM57BQ71RH2 274 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 TMED4Q7Z7H5 227 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 CALHM1Q8IU99 346 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 KIR2DL5AQ8N109 375 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 ZNF555Q8NEP9 628 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 BEST4Q8NFU0 473 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 OR10H4Q8NGA5 316 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 OR5A2Q8NGI9 324 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 OR13C9Q8NGT0 318 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 THEM6Q8WUY1 208 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 OR5P3Q8WZ94 311 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 RPUSD4Q96CM3 377 aaKnown RBP6.99□□□□□ -1.29
GPC6-202ENST00000617456 PGAM5Q96HS1 289 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 HIST1H2AAQ96QV6 131 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 SLC5A7Q9GZV3 580 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 SIRPDQ9H106 197 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 HRH4Q9H3N8 390 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 MOB1AQ9H8S9 216 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 ADGRL4Q9HBW9 690 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
GPC6-202ENST00000617456 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 RHBDD3Q9Y3P4 386 aa6.99□□□□□ -1.29
GPC6-202ENST00000617456 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 TRAV34A0A0B4J273 112 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 OR5B21A6NL26 309 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 F6UZH7 168 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 NDUFB3O43676 98 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 CLIC3O95833 236 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 IGLV3-1P01715 115 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 GYPAP02724 150 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 GIPP09681 153 aaPredicted RBP6.98□□□□□ -1.29
GPC6-202ENST00000617456 UBBP0CG47 229 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 UBCP0CG48 685 aaKnown RBP6.98□□□□□ -1.29
GPC6-202ENST00000617456 NFYAP23511 347 aaPredicted RBP6.98□□□□□ -1.29
GPC6-202ENST00000617456 ZBTB25P24278 435 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 GABRA5P31644 462 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 CAV3P56539 151 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 RAP2BP61225 183 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 RPS27AP62979 156 aaKnown RBP6.98□□□□□ -1.29
GPC6-202ENST00000617456 GNG3P63215 75 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 MXD1Q05195 221 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 CEACAM21Q3KPI0 293 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 MORN2Q502X0 79 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 LRRC10Q5BKY1 277 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 C1orf194Q5T5A4 169 aa6.98□□□□□ -1.29
GPC6-202ENST00000617456 PLCXD3Q63HM9 321 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms