RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RPL12P30050 165 aaKnown RBP6.44□□□□□ -1.38
NEK3-207ENST00000617054 AKR1C2P52895 323 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 LOXL3P58215 753 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 OR2F1Q13607 317 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SPINK9Q5DT21 86 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 PRAMEF5Q5TYX0 476 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 VKORC1L1Q8N0U8 176 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 ZNF645Q8N7E2 425 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 LRTM2Q8N967 370 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TCTEX1D2Q8WW35 142 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 GPR146Q96CH1 333 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 NSG2Q9Y328 171 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 POLQO75417 2590 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 IGHV1-69-2A0A0G2JMI3 117 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 H0Y980 276 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 BCL2L11O43521 198 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 NDUFS7O75251 213 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 IGKV1-5P01602 117 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 GZMHP20718 246 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 RND3P61587 244 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 FBXL19-AS1Q494R0 122 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 ZNF672Q499Z4 452 aaPredicted RBP6.44□□□□□ -1.38
NEK3-207ENST00000617054 RPL7L1Q6DKI1 246 aaKnown RBP6.44□□□□□ -1.38
NEK3-207ENST00000617054 SSX9Q7RTT3 188 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 FAM185AQ8N0U4 392 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 Q8TCH9 128 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 ASB13Q8WXK3 278 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SDSLQ96GA7 329 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 CYTL1Q9NRR1 136 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 CTSZQ9UBR2 303 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SLC25A10Q9UBX3 287 aaPredicted RBP6.44□□□□□ -1.38
NEK3-207ENST00000617054 LAMP3Q9UQV4 416 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TMED3Q9Y3Q3 217 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TANC2Q9HCD6 1990 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 NPIPB11E5RHQ5 1161 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TMEM50AO95807 157 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SFTPCP11686 197 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 LPAR6P43657 344 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 CAV2P51636 162 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TMEM33P57088 247 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 RPS16P62249 146 aaKnown RBP6.44□□□□□ -1.38
NEK3-207ENST00000617054 NMSQ5H8A3 153 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 NCR3LG1Q68D85 454 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 TMEM217Q8N7C4 229 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 DMBX1Q8NFW5 382 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 OR4D5Q8NGN0 318 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 CACNG5Q9UF02 275 aa6.44□□□□□ -1.38
NEK3-207ENST00000617054 WRBO00258 174 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 SIGLEC5O15389 551 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CHST1O43916 411 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 S1PR2O95136 353 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CLDN1O95832 211 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 LOXP28300 417 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 S100GP29377 79 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 PLA2G5P39877 138 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 NKX2-1P43699 371 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 RPL31P62899 125 aaKnown RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 SMCO1Q147U7 214 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 SPAG16Q8N0X2 631 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 OR5D13Q8NGL4 314 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 TMED6Q8WW62 240 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 ITLN2Q8WWU7 325 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 C14orf79Q96F83 325 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 BBC3Q96PG8 261 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 TRGV10A0A0A0MS01 117 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 LEUTXA8MZ59 168 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 DVL1O14640 695 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 ST8SIA3O43173 380 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CST7O76096 145 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 RNF224P0DH78 156 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 IAPPP10997 89 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 MUC1P15941 1255 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 C4BPBP20851 252 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 VDAC1P21796 283 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 NUP62P37198 522 aaPredicted RBP6.43□□□□□ -1.38
NEK3-207ENST00000617054 CDKN1AP38936 164 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 GPR12P47775 334 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 PMS2P11Q13670 270 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 HNF4GQ14541 408 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 ZNF345Q14585 488 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 NDUFA5Q16718 116 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CT45A1Q5HYN5 189 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 TEX36Q5VZQ5 186 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 C1orf122Q6ZSJ8 110 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CT45A3Q8NHU0 189 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 PLEKHF2Q9H8W4 249 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 CHD6Q8TD26 2715 aa6.43□□□□□ -1.38
NEK3-207ENST00000617054 TRAV38-1A0A0B4J264 116 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 KBTBD11-OT1A0A1B0GTJ5 212 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
NEK3-207ENST00000617054 CD55P08174 381 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 NMBP08949 121 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 S100A1P23297 94 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 RAB14P61106 215 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 CLINT1Q14677 625 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 HFEQ30201 348 aa6.42□□□□□ -1.38
NEK3-207ENST00000617054 WFDC1Q9HC57 220 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms