RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 Q8WTZ3 238 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 TNFRSF9Q07011 255 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 ZNF645Q8N7E2 425 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 VENTXO95231 258 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 CBLN1P23435 193 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 C3AR1Q16581 482 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 BIVMQ86UB2 503 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 SPTBP11277 2137 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 GOSR1O95249 250 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 ERVFRD-1P60508 538 aa16.26■□□□□ 0.19
SPAST-203ENST00000615843 SRSF3P84103 164 aaKnown RBP16.26■□□□□ 0.19
SPAST-203ENST00000615843 HLA-DRB1P01911 266 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 ZNF818PQ6ZRF7 136 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 SFTPA2Q8IWL1 248 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 GCSHP23434 173 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 LCN2P80188 198 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 RCC1LQ96I51 464 aaKnown RBP16.25■□□□□ 0.19
SPAST-203ENST00000615843 DNAJC4Q9NNZ3 241 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 R4GN57 208 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 EPHA8P29322 1005 aaPredicted RBP16.25■□□□□ 0.19
SPAST-203ENST00000615843 SPSB4Q96A44 273 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 GRAMD2BQ96HH9 432 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 A0A0J9YW62 118 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 A0A1W2PPE3 182 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 UBE2CO00762 179 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 IZUMO4Q1ZYL8 232 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 GALNT14Q96FL9 552 aa16.25■□□□□ 0.19
SPAST-203ENST00000615843 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
SPAST-203ENST00000615843 DPRXA6NFQ7 191 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 HYPMO75409 117 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 NDUFAF3Q9BU61 184 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 RAMP1O60894 148 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 MAS1LP35410 378 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 TPRX1Q8N7U7 411 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 LSM10Q969L4 123 aaKnown RBP16.24■□□□□ 0.19
SPAST-203ENST00000615843 ZNFX1Q9P2E3 1918 aaKnown RBP16.24■□□□□ 0.19
SPAST-203ENST00000615843 ADRA2AP08913 450 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 ZNF841Q6ZN19 808 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 ZCCHC14Q8WYQ9 949 aaKnown RBP16.24■□□□□ 0.19
SPAST-203ENST00000615843 GLRX2Q9NS18 164 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 HIGD1AQ9Y241 93 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 A0A1B0GTI1 187 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 ZG16O60844 167 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 LINC00869P0C866 280 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 CEACAM3P40198 252 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 MAGEA5P43359 124 aa16.24■□□□□ 0.19
SPAST-203ENST00000615843 FAM157AC9JC47 383 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 EGR1P18146 543 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 KIR2DL1P43626 348 aaPredicted RBP16.23■□□□□ 0.19
SPAST-203ENST00000615843 RNF7Q9UBF6 113 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 OR2H2O95918 312 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 CRYBB3P26998 211 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 TMEM108Q6UXF1 575 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 CYP2G1PQ6ZSU1 146 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 OR2J1Q9GZK6 312 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 KIR2DL2P43627 348 aaPredicted RBP16.23■□□□□ 0.19
SPAST-203ENST00000615843 SNAI3Q3KNW1 292 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 APOBEC4Q8WW27 367 aaKnown RBP16.23■□□□□ 0.19
SPAST-203ENST00000615843 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
SPAST-203ENST00000615843 SEC16AO15027 2179 aa16.23■□□□□ 0.19
SPAST-203ENST00000615843 TMEM238LA0A1B0GVL6 79 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 A6NJY4 79 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 BTF3P20290 206 aaKnown RBP16.22■□□□□ 0.19
SPAST-203ENST00000615843 DNLZQ5SXM8 178 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 MDP1Q86V88 176 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 CTHRC1Q96CG8 243 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 IER2Q9BTL4 223 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 CEACAM18A8MTB9 384 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 BMI1P35226 326 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 HOXA4Q00056 320 aaPredicted RBP16.22■□□□□ 0.19
SPAST-203ENST00000615843 RND1Q92730 232 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 AGFG2O95081 481 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 CLDN14O95500 239 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 OR4A8P0C604 315 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 APELAP0DMC3 54 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 NUBP1P53384 320 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 WDYHV1Q96HA8 205 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 PGLYRP4Q96LB8 373 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 LOC107984156A0A0G2JMH3 177 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 NPIPB7O75200 414 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 RTP5Q14D33 572 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 LY6G6FQ5SQ64 297 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 ARL17AQ8IVW1 177 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 HEXA-AS1Q9H8Q6 139 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 IGHV3-21A0A0B4J1V1 117 aa16.22■□□□□ 0.19
SPAST-203ENST00000615843 IGHV3OR15-7A0A075B7D8 119 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 M0R3E3 92 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 TWIST1Q15672 202 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 PEF1Q9UBV8 284 aaKnown RBP16.21■□□□□ 0.19
SPAST-203ENST00000615843 PRDX2P32119 198 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 RTBDNQ9BSG5 229 aaPredicted RBP16.21■□□□□ 0.19
SPAST-203ENST00000615843 OPN3Q9H1Y3 402 aaPredicted RBP16.21■□□□□ 0.19
SPAST-203ENST00000615843 TRGV8A0A0C4DH27 118 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 TMEM189A5PLL7 270 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 GREM1O60565 184 aa16.21■□□□□ 0.19
SPAST-203ENST00000615843 CRYABP02511 175 aaKnown RBP16.21■□□□□ 0.19
SPAST-203ENST00000615843 MGPP08493 103 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms