RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 LYZL4Q96KX0 146 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 PHF7Q9BWX1 381 aaPredicted RBP8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 RALGAPA1Q6GYQ0 2036 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 A0A1W2PPV4 95 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 IGHMP01871 453 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 SCTP09683 121 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 PSG2P11465 335 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 COX5AP20674 150 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 GFERP55789 205 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 NSDHLQ15738 373 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 LPAL2Q16609 132 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 AMMECR1LQ6DCA0 310 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZNF439Q8NDP4 499 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 OR5D13Q8NGL4 314 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 FAM131CQ96AQ9 280 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 KCNS2Q9ULS6 477 aa8.86□□□□□ -0.99
TNFAIP3-208ENST00000615468 IGKV1D-13A0A0B4J2D9 117 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 FRG2CA6NGY1 282 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 M0R135 149 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 TLX3O43711 291 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 TOMM40O96008 361 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 GPX1P07203 203 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 IFI6P09912 130 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 IGKV1-13P0DP09 117 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ATP5G3P48201 142 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 PRDX4Q13162 271 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 PIGCQ92535 297 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZNF501Q96CX3 271 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZNF799Q96GE5 643 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 LRFN3Q9BTN0 628 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 GNB4Q9HAV0 340 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 TP53TG3Q9ULZ0 132 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 HS3ST1O14792 307 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 PDCD6O75340 191 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZP4Q12836 540 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 PHYHD1Q5SRE7 291 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ACSM6Q6P461 480 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 WDFY4Q6ZS81 3184 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 TCL1AP56279 114 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZNF114Q8NC26 417 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 ABHD3Q8WU67 409 aa8.85□□□□□ -0.99
TNFAIP3-208ENST00000615468 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 FOXL1Q12952 345 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 UHRF2Q96PU4 802 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 LRRC61Q9BV99 259 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 ZNF891A8MT65 544 aaPredicted RBP8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 CD38P28907 300 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 LHX2P50458 406 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 CNN3Q15417 329 aaKnown RBP8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 C16orf54Q6UWD8 224 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 CENPVQ7Z7K6 275 aaPredicted RBP8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 KLRF1Q9NZS2 232 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 PPP1R3CQ9UQK1 317 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 PTRH2Q9Y3E5 179 aaKnown RBP8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 FRYLO94915 3013 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 SPTY2D1-AS1A0A0U1RR47 76 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 OR2T8A6NH00 312 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 RBFOX2O43251 390 aaKnown RBP eCLIP8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 NUDT3O95989 172 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 UCP1P25874 307 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 KRTCAP3Q53RY4 240 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 TMEM108Q6UXF1 575 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 GJC3Q8NFK1 279 aa8.84□□□□□ -0.99
TNFAIP3-208ENST00000615468 SDK2Q58EX2 2172 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 GOSR1O95249 250 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 SRFP11831 508 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 MPV17L2Q567V2 206 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 PLCXD3Q63HM9 321 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 OR8I2Q8N0Y5 310 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 UBALD1Q8TB05 177 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 A0A1W2PPC4 97 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 SLC22A20A6NK97 555 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 WNT2P09544 360 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 FRMD6-AS1P0C7T7 363 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 COMPP49747 757 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 GFRA1P56159 465 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 LINC00310P59036 64 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 GNB1P62873 340 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 Q6ZRM9 215 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 IFI44Q8TCB0 444 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 APOBEC3DQ96AK3 386 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 AP1S3Q96PC3 154 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 GAGE12BA1L429 117 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 HSBP1O75506 76 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 PGLYRP1O75594 196 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 NPPCP23582 126 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 F2RP25116 425 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 OR52L2PQ8NGH6 319 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 SPTSSAQ969W0 71 aa8.83□□□□□ -1
TNFAIP3-208ENST00000615468 EP300Q09472 2414 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-208ENST00000615468 IGHV1-69-2A0A0G2JMI3 117 aa8.82□□□□□ -1
TNFAIP3-208ENST00000615468 LRP5LA4QPB2 252 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms