RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 FBLIM1Q8WUP2 373 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 SCMH1Q96GD3 660 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ZNF665Q9H7R5 613 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 IGKV1D-8A0A087WSZ0 117 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 MSGN1A6NI15 193 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 LRRC3CA6NJW4 275 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 RPL36A-HNRNPH2H7BZ11 118 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 S1PR2O95136 353 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 GAPDHP04406 335 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 SLC25A5P05141 298 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 TRAPPC2P0DI81 140 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TRAPPC2BP0DI82 140 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CTRB1P17538 263 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 THBS3P49746 956 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ATP5J2P56134 94 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TMPRSS3P57727 454 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 EWSR1Q01844 656 aaKnown RBP eCLIP3.24□□□□□ -1.89
LTN1-207ENST00000614971 CTRB2Q6GPI1 263 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 PRSS54Q6PEW0 395 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 C15orf54Q8N8G6 183 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TP53RKQ96S44 253 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 GHITMQ9H3K2 345 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 GAL3ST2Q9H3Q3 398 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 PARP11Q9NR21 331 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 SIP14410 1827 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 A0A0U1RQV5 110 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 DBX1A6NMT0 343 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 J3QR06 171 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 PAGE4O60829 102 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ZNF737O75373 536 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CT45A10P0DMU9 189 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CEACAM1P13688 526 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 GALP22466 123 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ATP6V0CP27449 155 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 FGF12P61328 243 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TMEM171Q8WVE6 324 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TIMM9Q9Y5J7 89 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 IGKV3D-15A0A087WSY6 115 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TRAV34A0A0B4J273 112 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 MUC21A0A0G2JKD1 596 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 MUC21A0A140T8X8 626 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ODAMA1E959 279 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 PPP1R2P9O14990 202 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CST4P01036 141 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 IGKV3-15P01624 115 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CTSDP07339 412 aaPredicted RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 PMCHP20382 165 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 GATA2P23769 480 aaPredicted RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 CTSSP25774 331 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 FCER1GP30273 86 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 MUC21Q5SSG8 566 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TRAT1Q6PIZ9 186 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CD200R1LQ6Q8B3 271 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ZNF705AQ6ZN79 300 aaPredicted RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 HOGA1Q86XE5 327 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 OR8B3Q8NGG8 313 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 LILRB1Q8NHL6 650 aaPredicted RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 SNRNP40Q96DI7 357 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 LOXL4Q96JB6 756 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 OR8B2Q96RD0 313 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 SLC17A5Q9NRA2 495 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 PRRC2AP48634 2157 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 A0A0G2JK05 382 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 AHRRA9YTQ3 701 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TGOLN2O43493 480 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 MBPP02686 304 aaPredicted RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 ZNF137PP52743 207 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 CD81P60033 236 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 UBE2L3P68036 154 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 CYYR1Q96J86 154 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 WFIKKN1Q96NZ8 548 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 ZNF426Q9BUY5 554 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 TECRQ9NZ01 308 aaKnown RBP3.24□□□□□ -1.89
LTN1-207ENST00000614971 KCNMB2Q9Y691 235 aa3.24□□□□□ -1.89
LTN1-207ENST00000614971 C7orf66A4D0T2 115 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 S100A4P26447 101 aaKnown RBP3.23□□□□□ -1.89
LTN1-207ENST00000614971 CLDN18P56856 261 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 RHOBP62745 196 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 PJVKQ0ZLH3 352 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 NCMAPQ5T1S8 102 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 MRPL54Q6P161 138 aaKnown RBP3.23□□□□□ -1.89
LTN1-207ENST00000614971 FGFRL1Q8N441 504 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 OR8G5Q8NG78 346 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 OR4S2Q8NH73 311 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 NEUROG1Q92886 237 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 VOPP1Q96AW1 172 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 FAM122AQ96E09 287 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 LYZL4Q96KX0 146 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 ASCL3Q9NQ33 180 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 RABAC1Q9UI14 185 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 MYO15AQ9UKN7 3530 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 TSC2P49815 1807 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 G3V3Q6 166 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 GNG7O60262 68 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 LYPD3O95274 346 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
LTN1-207ENST00000614971 TUSC1Q2TAM9 212 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 ASPHD2Q6ICH7 369 aa3.23□□□□□ -1.89
LTN1-207ENST00000614971 FAM53AQ6NSI3 398 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms