RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CD99P14209 185 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 GNB2P62879 340 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF525Q8N782 197 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF799Q96GE5 643 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 RSG1Q9BU20 258 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 SLC7A10Q9NS82 523 aa18.61■□□□□ 0.57
POLR2J3-220ENST00000613744 SMG1Q96Q15 3661 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNHIT1O43257 154 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 SPRY1O43609 319 aaPredicted RBP18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 CNOT4O95628 575 aaKnown RBP18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 PSMB3P49720 205 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 FGF8P55075 233 aaPredicted RBP18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 SPIN3Q5JUX0 258 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 TEX43Q6ZNM6 134 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 DYRK2Q92630 601 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 BORCS8Q96FH0 119 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 TBX15Q96SF7 602 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 MANBALQ9NQG1 85 aa18.6■□□□□ 0.57
POLR2J3-220ENST00000613744 A0A1W2PNR3 127 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 PAFAH1B2P68402 229 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 HBG1P69891 147 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 HBG2P69892 147 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 ENDOGQ14249 297 aaKnown RBP18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 VSIRQ9H7M9 311 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 GPR35Q9HC97 309 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF581Q9P0T4 197 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 IL6RP08887 468 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 WNT2P09544 360 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 IRF2P14316 349 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 RPL15P61313 204 aaKnown RBP18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 RSPO1Q2MKA7 263 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 PRR30Q53SZ7 412 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 SSX7Q7RTT5 188 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 ST3GAL6Q9Y274 331 aa18.59■□□□□ 0.57
POLR2J3-220ENST00000613744 IGKV1-27A0A075B6S5 117 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A10PA6NDY2 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A18PA6NE21 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A16PA6NEW6 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A20PA6NIJ5 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A8PA6NJQ4 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A7PA6NKC0 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF705FA8MVS1 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A22PA8MWA6 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A12PA8MX19 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A5PA8MXJ8 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A23PA8MXZ1 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A15PP0C7V4 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A13PP0C7W8 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A14PP0C7W9 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FAM90A24PP0C7X0 464 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF705DP0CH99 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF705BP0CI00 300 aaPredicted RBP18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 FKBP2P26885 142 aaKnown RBP18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF818PQ6ZRF7 136 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 C20orf196Q8IYI0 205 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 LHX4Q969G2 390 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ELOVL1Q9BW60 279 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 PARLQ9H300 379 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 SLC39A9Q9NUM3 307 aa18.58■□□□□ 0.57
POLR2J3-220ENST00000613744 ZNF407Q9C0G0 2248 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 TUSC2O75896 110 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 LCATP04180 440 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 CTXN2P0C2S0 81 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 PIGYQ3MUY2 71 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM42Q69YG0 159 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 ZNF295-AS1Q8N0V1 137 aa18.58■□□□□ 0.56
POLR2J3-220ENST00000613744 YLPM1P49750 1951 aaKnown RBP18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 AQP7P3A6NL99 342 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 KIAA1324LA8MWY0 1029 aaPredicted RBP18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 YPEL1O60688 119 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 S100GP29377 79 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM183BQ1AE95 376 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 Q6ZPA2 131 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 GAPTQ8N292 157 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 MRPL30Q8TCC3 161 aaKnown RBP18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 DTD1Q8TEA8 209 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 WDYHV1Q96HA8 205 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 YPEL2Q96QA6 119 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 ZFP30Q9Y2G7 519 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 PXMP4Q9Y6I8 212 aa18.57■□□□□ 0.56
POLR2J3-220ENST00000613744 GYPAP02724 150 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 RBM11P57052 281 aaKnown RBP18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 B3GALT5-AS1P59052 145 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM267Q0VDI3 215 aaPredicted RBP18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 COL5A1-AS1Q5SY13 56 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM54Q969K7 222 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 OR2J1Q9GZK6 312 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 WDR61Q9GZS3 305 aaKnown RBP18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 ZNF442Q9H7R0 627 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM106BQ9NUM4 274 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 ZNF391Q9UJN7 358 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 A6NNC1 897 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 KLRB1Q12918 225 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 RPUSD4Q96CM3 377 aaKnown RBP18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 TECTBQ96PL2 329 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 ZDHHC11Q9H8X9 412 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 TRAPPC1Q9Y5R8 145 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 MYO7BQ6PIF6 2116 aa18.56■□□□□ 0.56
POLR2J3-220ENST00000613744 IGKV1-12A0A0C4DH73 117 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 IGKV1D-12P01611 117 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms