RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	SPAAR	A0A1B0GVQ0	90 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	LRP5L	A4QPB2	252 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	ZFP92	A6NM28	416 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	DEFB108A	A8MXU0	73 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	SH2D1B	O14796	132 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	TNFSF10	P50591	281 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	ARL16	Q0P5N6	197 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	GFI1B	Q5VTD9	330 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	BTNL3	Q6UXE8	466 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF497	Q6ZNH5	498 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	LINC00596	Q86U02	117 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	DRAM1	Q8N682	238 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	OR52L2P	Q8NGH6	319 aa		10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	RNASE8	Q8TDE3	154 aa	Known RBP	10.88	□□□□□ -0.67
SMTN-222	ENST00000612341	SYNGR2	O43760	224 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	HOXC12	P31275	282 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	GABRA2	P47869	451 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	RBX1	P62877	108 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	SPINK9	Q5DT21	86 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	LFNG	Q8NES3	379 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	RYDEN	Q9NUL5	291 aa	Known RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	INTS1	Q8N201	2190 aa	Known RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	RAMP3	O60896	148 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	HAND1	O96004	215 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	ELL	P55199	621 aa	Predicted RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF585B	Q52M93	769 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	SCGB1C1	Q8TD33	95 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	MRGPRD	Q8TDS7	321 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	SNHG12	Q9BXW3	62 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	OR2D2	Q9H210	308 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	KMT2E	Q8IZD2	1858 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341		A0A1B0GU03	582 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	HMGB3	O15347	200 aa	Known RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	RBMXL2	O75526	392 aa	Known RBP	10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	IGHV3-13	P01766	116 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	IGHV3-7	P01780	117 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	IL2RG	P31785	369 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	BAX	Q07812	192 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	DEFB124	Q8NES8	71 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	CABLES2	Q9BTV7	478 aa		10.87	□□□□□ -0.67
SMTN-222	ENST00000612341	DUXB	A0A1W2PPF3	345 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	CLEC18A	A5D8T8	446 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341		H3BQ15	152 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	MT-ND4L	P03901	98 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	RAB5A	P20339	215 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	HOXA5	P20719	270 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	FOXF2	Q12947	444 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF880	Q6PDB4	577 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	CLEC18C	Q8NCF0	446 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	NCOR1P1	Q9H4R4	102 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	ZDHHC11	Q9H8X9	412 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	TIMM8A	O60220	97 aa	Predicted RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	OR2C1	O95371	312 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	CLDN1	O95832	211 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	PGA5	P0DJD9	388 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	G6PC	P35575	357 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	TAGLN2	P37802	199 aa	Known RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF343	Q6P1L6	599 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	FAM214B	Q7L5A3	538 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	FAM122A	Q96E09	287 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	METRN	Q9UJH8	293 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341		A8MWP6	167 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341		A8MXE2	369 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	MLNR	O43193	412 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	WT1	P19544	449 aa	Predicted RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	CDX1	P47902	265 aa	Predicted RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	TAS2R30	P59541	319 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	UBE2K	P61086	200 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	KIAA0141	Q14154	515 aa	Predicted RBP	10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	EDDM3A	Q14507	147 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	C1orf185	Q5T7R7	199 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	FGFRL1	Q8N441	504 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	RPRM	Q9NS64	109 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	KCNIP1	Q9NZI2	227 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	WSB1	Q9Y6I7	421 aa		10.86	□□□□□ -0.67
SMTN-222	ENST00000612341	TPR	P12270	2363 aa	Known RBP	10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	TRBV6-6	A0A0A6YYG2	114 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	GABRA6	Q16445	453 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	IL22RA2	Q969J5	263 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	RAB39B	Q96DA2	213 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	RAB40C	Q96S21	281 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	DCTN5	Q9BTE1	182 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF665	Q9H7R5	613 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	C12orf77	C9JDV5	145 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	TCF21	O43680	179 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	SSTR5	P35346	364 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	ERVK11-1	P61568	191 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	RPS23	P62266	143 aa	Known RBP	10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	RAB11A	P62491	216 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	TLE4	Q04727	773 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	ZNF429	Q86V71	674 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	C9orf106	Q8NAJ2	232 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	LIN7C	Q9NUP9	197 aa	Known RBP	10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	KIAA1456	Q9P272	454 aa		10.85	□□□□□ -0.67
SMTN-222	ENST00000612341	UBE2L5P	A0A1B0GUS4	154 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms