RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 RAB13P51153 203 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 BIVMQ86UB2 503 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 SNX22Q96L94 193 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 C12orf77C9JDV5 145 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 ETV2O00321 342 aaPredicted RBP11.17□□□□□ -0.62
TCF3-220ENST00000611869 LY86O95711 162 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 CRYBA1P05813 215 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 NAT1P18440 290 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 BPIFB3P59826 476 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 S100A7AQ86SG5 101 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 CYB561D1Q8N8Q1 229 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PROK2Q9HC23 129 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
TCF3-220ENST00000611869 F8VVB4 439 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 F8VWA3 439 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 CCL21O00585 134 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 DLK1P80370 383 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 OR4C12Q96R67 309 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 TECTAO75443 2155 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 TFF1P04155 84 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 OTX1P32242 354 aaPredicted RBP11.16□□□□□ -0.62
TCF3-220ENST00000611869 ACSF3Q4G176 576 aaPredicted RBP11.16□□□□□ -0.62
TCF3-220ENST00000611869 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 RBKSQ9H477 322 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 CACNA1BQ00975 2339 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 TSTD3H0UI37 97 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 OR4A8P0C604 315 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 APELAP0DMC3 54 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 NPY1RP25929 384 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 WNT5AP41221 380 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 MRPL30Q8TCC3 161 aaKnown RBP11.16□□□□□ -0.62
TCF3-220ENST00000611869 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
TCF3-220ENST00000611869 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
TCF3-220ENST00000611869 IGSF23A1L1A6 192 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 RAB29O14966 203 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 PAGE4O60829 102 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 HPRT1P00492 218 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 RHOBP62745 196 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 TGIF2LYQ8IUE0 185 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 PLPPR1Q8TBJ4 325 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 TUBG2Q9NRH3 451 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 MMP9P14780 707 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 UCP1P25874 307 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 SUPT4H1P63272 117 aaKnown RBP11.15□□□□□ -0.62
TCF3-220ENST00000611869 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 DVL1O14640 695 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 ZG16O60844 167 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 TOX4O94842 621 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 GNB2P62879 340 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 VKORC1L1Q8N0U8 176 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 FAM210BQ96KR6 192 aa11.15□□□□□ -0.62
TCF3-220ENST00000611869 AURKAIP1Q9NWT8 199 aaPredicted RBP11.15□□□□□ -0.62
TCF3-220ENST00000611869 IGHV2OR16-5A0A0B4J2B6 119 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.63
TCF3-220ENST00000611869 J3QR06 171 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 MPZP25189 248 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 CHRNB4P30926 498 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 BSXQ3C1V8 233 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 ZNF66Q6ZN08 573 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 ZNF835Q9Y2P0 537 aa11.15□□□□□ -0.63
TCF3-220ENST00000611869 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 MARCH11A6NNE9 402 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 C11orf94C9JXX5 98 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 CEACAM1P13688 526 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 FOXF2Q12947 444 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 TNXAQ16473 311 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 ACSM6Q6P461 480 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 ACP7Q6ZNF0 438 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 SH2D2AQ9NP31 389 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 USF3Q68DE3 2245 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 HOXD4P09016 255 aaPredicted RBP11.14□□□□□ -0.63
TCF3-220ENST00000611869 B2MP61769 119 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 MRGPRGQ86SM5 289 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 LDLRAD3Q86YD5 345 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 GNB4Q9HAV0 340 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 TUBD1Q9UJT1 453 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 TRAV24A0A0B4J272 114 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 IL18BPO95998 194 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 DANCRP0C864 163 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 GLRXP35754 106 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 TNFRSF9Q07011 255 aa11.14□□□□□ -0.63
TCF3-220ENST00000611869 TIMM23BQ5SRD1 257 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms