RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF561Q8N587 486 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 HIST1H2BAQ96A08 127 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 MALSU1Q96EH3 234 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 YPEL2Q96QA6 119 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 OR4C12Q96R67 309 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 AGMATQ9BSE5 352 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 RPRMQ9NS64 109 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 FZR1Q9UM11 496 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 GAB2Q9UQC2 676 aa8.72□□□□□ -1.01
PABPC1-224ENST00000610907 URB1O60287 2271 aaKnown RBP8.71□□□□□ -1.01
PABPC1-224ENST00000610907 ZNF318Q5VUA4 2279 aa8.71□□□□□ -1.01
PABPC1-224ENST00000610907 IGKV1D-17A0A075B6S4 117 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 LOC102723971A0A1B0GUV8 181 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 A0A1B0GV50 99 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 MED19A0JLT2 244 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 ODAMA1E959 279 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 C17orf98A8MV24 154 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 TM4SF5O14894 197 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 RBFOX2O43251 390 aaKnown RBP eCLIP8.71□□□□□ -1.023e-11■■□□□ 11.8
PABPC1-224ENST00000610907 RAMP3O60896 148 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 NDUFS6O75380 124 aaKnown RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 LHBP01229 141 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 MBP02144 154 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 IFNA4P05014 189 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 CEACAM8P31997 349 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 G6PCP35575 357 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 GATA4P43694 442 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF83P51522 516 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 SELENOVP59797 346 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 AARDQ4LEZ3 155 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 TMEM41BQ5BJD5 291 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 H2BFWTQ7Z2G1 175 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF808Q8N4W9 903 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 PRSS33Q8NF86 280 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 TAF15Q92804 592 aaKnown RBP eCLIP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 S100PBPQ96BU1 408 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 C5orf30Q96GV9 206 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 MEGF10Q96KG7 1140 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 P2RX4Q99571 388 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 SAV1Q9H4B6 383 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 CISD1Q9NZ45 108 aaKnown RBP8.71□□□□□ -1.02
PABPC1-224ENST00000610907 OR6C3Q9NZP0 311 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 METRNQ9UJH8 293 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 FAM215AQ9Y5M1 114 aa8.71□□□□□ -1.02
PABPC1-224ENST00000610907 KIAA2026Q5HYC2 2103 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 INTS1Q8N201 2190 aaKnown RBP8.7□□□□□ -1.02
PABPC1-224ENST00000610907 CXorf65A6NEN9 183 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 B4DEV8 164 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 H3BQ15 152 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 M0R1B8 84 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 F2RL2O00254 374 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 SOX15O60248 233 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 S1PR2O95136 353 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 HPRT1P00492 218 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 IFNA1P01562 189 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 SSTR5P35346 364 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 TAGLN2P37802 199 aaKnown RBP8.7□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF816Q0VGE8 651 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-224ENST00000610907 HAGHQ16775 308 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 MORN2Q502X0 79 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 AKIRIN2Q53H80 203 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 SLC35E3Q7Z769 313 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF429Q86V71 674 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 LINC00518Q8N0U6 118 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 OR10P1Q8NGE3 313 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 TVP23CQ96ET8 276 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 NIPSNAP3BQ9BS92 247 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 TMEM147Q9BVK8 224 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 SIRT7Q9NRC8 400 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 PSG11Q9UQ72 335 aa8.7□□□□□ -1.02
PABPC1-224ENST00000610907 PUS1Q9Y606 427 aaKnown RBP eCLIP8.7□□□□□ -1.02
PABPC1-224ENST00000610907 RAB5AP20339 215 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 AGAP20933 346 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 DUTP33316 252 aaKnown RBP8.69□□□□□ -1.02
PABPC1-224ENST00000610907 KIR2DS2P43631 304 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 GPR12P47775 334 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 GNB2P62879 340 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 GTF3C1Q12789 2109 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 TCF15Q12870 199 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 VWC2Q2TAL6 325 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF787Q6DD87 383 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 ETV3LQ6ZN32 361 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 SSX8Q7RTT4 187 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 MRGPRGQ86SM5 289 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 FAM57AQ8TBR7 257 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 DTD1Q8TEA8 209 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 FAM222BQ8WU58 562 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 OR2V2Q96R30 315 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 MARCH11A6NNE9 402 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 LINC00473A8K010 186 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 PMS2P5A8MQ11 134 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 BCL2P10415 239 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 EGR1P18146 543 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 AKR1C3P42330 323 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 RAB7AP51149 207 aa8.69□□□□□ -1.02
PABPC1-224ENST00000610907 RPP30P78346 268 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms