RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 IL3RAP26951 378 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 GNB2P62879 340 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 LYSMD4Q5XG99 296 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 BTNL3Q6UXE8 466 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 PXMP4Q9Y6I8 212 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 PDGFBP01127 241 aaPredicted RBP18.84■□□□□ 0.61
SHANK2-220ENST00000608988 RAB4AP20338 218 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 LINC01551Q86U37 167 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 TRAPPC1Q9Y5R8 145 aa18.84■□□□□ 0.61
SHANK2-220ENST00000608988 NCKAP5O14513 1909 aa18.83■□□□□ 0.61
SHANK2-220ENST00000608988 TRAV9-1A0A075B6T8 112 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 J3QW42 95 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 EREGO14944 169 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 OR4A8P0C604 315 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 CDC34P49427 236 aaPredicted RBP18.83■□□□□ 0.6
SHANK2-220ENST00000608988 UBE2NP61088 152 aaKnown RBP18.83■□□□□ 0.6
SHANK2-220ENST00000608988 EIF4EBP1Q13541 118 aaPredicted RBP18.83■□□□□ 0.6
SHANK2-220ENST00000608988 NUFIP2Q7Z417 695 aaKnown RBP18.83■□□□□ 0.6
SHANK2-220ENST00000608988 KCNIP1Q9NZI2 227 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 UNC80Q8N2C7 3258 aa18.83■□□□□ 0.6
SHANK2-220ENST00000608988 K7ESF4 209 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 OR2H2O95918 312 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 ERVK11-1P61568 191 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 FAM78BQ5VT40 261 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 PPP1R32Q7Z5V6 425 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 TDHQ8IZJ6 230 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 DTD1Q8TEA8 209 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 DEPPQ9NTK1 212 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 NAGKQ9UJ70 344 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 CHD3Q12873 2000 aaKnown RBP18.82■□□□□ 0.6
SHANK2-220ENST00000608988 NTN3O00634 580 aaPredicted RBP18.82■□□□□ 0.6
SHANK2-220ENST00000608988 SH2D1BO14796 132 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 CLDN14O95500 239 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 RAC2P15153 192 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 CYB561P49447 251 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 ZNF146Q15072 292 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 FIP1L1Q6UN15 594 aaKnown RBP18.82■□□□□ 0.6
SHANK2-220ENST00000608988 WDR31Q8NA23 367 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 GATAD1Q8WUU5 269 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 R3HDM4Q96D70 268 aa18.82■□□□□ 0.6
SHANK2-220ENST00000608988 A0A1W2PR80 420 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 CXCL12P48061 93 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 APH1AQ96BI3 265 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 GMPPAQ96IJ6 420 aaPredicted RBP18.81■□□□□ 0.6
SHANK2-220ENST00000608988 TMEM68Q96MH6 324 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 TAAR6Q96RI8 345 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 SNHG12Q9BXW3 62 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 PPP1R14DQ9NXH3 145 aa18.81■□□□□ 0.6
SHANK2-220ENST00000608988 ODAMA1E959 279 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 ZNF503-AS2A6NEH8 195 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 SIRPB1O00241 398 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 HMGB3O15347 200 aaKnown RBP18.8■□□□□ 0.6
SHANK2-220ENST00000608988 GDF9O60383 454 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 RHBDL1O75783 438 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 SCGB1D1O95968 90 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 LHX2P50458 406 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 YPEL3P61236 119 aaPredicted RBP18.8■□□□□ 0.6
SHANK2-220ENST00000608988 A0A0U1RQK1 487 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 A0A1B0GWJ7 208 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 ZNF320A2RRD8 509 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 MPDU1O75352 247 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 NPPCP23582 126 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 TFF3Q07654 80 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 Q0VFX4 171 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 HLA-BQ31612 363 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 C9orf135Q5VTT2 229 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 TEX38Q6PEX7 206 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 TUSC5Q8IXB3 177 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 ZNF576Q9H609 170 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 B4GALT7Q9UBV7 327 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 CLN8Q9UBY8 286 aa18.8■□□□□ 0.6
SHANK2-220ENST00000608988 CHRNA7P36544 502 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 WNT5AP41221 380 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 SOX8P57073 446 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 PAFAH1B2P68402 229 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 IGFBP7Q16270 282 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 PRR18Q8N4B5 295 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 FAM173AQ9BQD7 235 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 POLR3KQ9Y2Y1 108 aaPredicted RBP18.79■□□□□ 0.6
SHANK2-220ENST00000608988 BRWD1Q9NSI6 2320 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 CABIN1Q9Y6J0 2220 aa18.79■□□□□ 0.6
SHANK2-220ENST00000608988 TMEM30CPA0ZSE6 113 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 PINLYPA6NC86 204 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 CCL4P13236 92 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 BTF3P20290 206 aaKnown RBP18.78■□□□□ 0.6
SHANK2-220ENST00000608988 CA6P23280 308 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 DUSP3P51452 185 aaPredicted RBP18.78■□□□□ 0.6
SHANK2-220ENST00000608988 TDGF1P3P51864 188 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 CLDN18P56856 261 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 GNB1P62873 340 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 NANOS1Q8WY41 292 aaKnown RBP18.78■□□□□ 0.6
SHANK2-220ENST00000608988 MS4A10Q96PG2 267 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 WDR83OSQ9Y284 106 aa18.78■□□□□ 0.6
SHANK2-220ENST00000608988 LILRA1O75019 489 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 WISP2O76076 250 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 KRASP01116 189 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 G6PCP35575 357 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 MPLP40238 635 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 SELENOTP62341 195 aa18.77■□□□□ 0.6
SHANK2-220ENST00000608988 CLEC12BQ2HXU8 276 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms