RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 CDH26Q8IXH8 852 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 OR5T1Q8NG75 326 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 GRPEL2Q8TAA5 225 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 NICN1Q9BSH3 213 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 C9orf16Q9BUW7 83 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 SLA2Q9H6Q3 261 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 RNF150Q9ULK6 438 aa12.81□□□□□ -0.36
CCDC12-210ENST00000604181 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
CCDC12-210ENST00000604181 RBMXL2O75526 392 aaKnown RBP12.8□□□□□ -0.36
CCDC12-210ENST00000604181 NAPSAO96009 420 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 ZNF383Q8NA42 475 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 POC5Q8NA72 575 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 HDHD3Q9BSH5 251 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-210ENST00000604181 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-210ENST00000604181 RANGRFQ9HD47 186 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-210ENST00000604181 STEAP1Q9UHE8 339 aa12.8□□□□□ -0.36
CCDC12-210ENST00000604181 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 RBBP9O75884 186 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 CSN3P07498 182 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 MYL12AP19105 171 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 MC5RP33032 325 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 FXYD3Q14802 87 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 NEDD4LQ96PU5 975 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 HIPK2Q9H2X6 1198 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 ABRACLQ9P1F3 81 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 NKX1-2Q9UD57 310 aaPredicted RBP12.79□□□□□ -0.36
CCDC12-210ENST00000604181 LRRC42Q9Y546 428 aa12.79□□□□□ -0.36
CCDC12-210ENST00000604181 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 SLC25A17O43808 307 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 ZP3P21754 424 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 UNC119Q13432 240 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 LINC00322Q6ZN03 302 aaPredicted RBP12.78□□□□□ -0.36
CCDC12-210ENST00000604181 TMEM80Q96HE8 168 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 UQCC2Q9BRT2 126 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
CCDC12-210ENST00000604181 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 SLC22A1O15245 554 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 JTBO76095 146 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 IGLV2-23P01705 113 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 IFNA6P05013 189 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 RPS16P62249 146 aaKnown RBP12.77□□□□□ -0.37
CCDC12-210ENST00000604181 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
CCDC12-210ENST00000604181 DYRK1AQ13627 763 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 NKAIN3Q8N8D7 197 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 SETD6Q8TBK2 473 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 GGHQ92820 318 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 RNF5Q99942 180 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.37
CCDC12-210ENST00000604181 H0Y980 276 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 CPEP16870 476 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 CELP19835 753 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 CD40LGP29965 261 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 CEACAM6P40199 344 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 MECP2P51608 486 aaKnown RBP12.76□□□□□ -0.37
CCDC12-210ENST00000604181 QRFPP83859 136 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 PQLC1Q8N2U9 271 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 TM2D1Q9BX74 207 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 TMEM59Q9BXS4 323 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 WFDC10AQ9H1F0 79 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 CHMP1AQ9HD42 196 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-210ENST00000604181 GHRLQ9UBU3 117 aa12.76□□□□□ -0.37
CCDC12-210ENST00000604181 IGKV1-6A0A0C4DH72 117 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 IRGMA1A4Y4 181 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 H3BUA1 57 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 SPDEFO95238 335 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 CRYGBP07316 175 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 SCTP09683 121 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 ST3GAL4Q11206 333 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 LAIR2Q6ISS4 152 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 DNAH10Q8IVF4 4471 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 TSNAXQ99598 290 aaKnown RBP12.75□□□□□ -0.37
CCDC12-210ENST00000604181 S100A14Q9HCY8 104 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 SMPD3Q9NY59 655 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-210ENST00000604181 AK3Q9UIJ7 227 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 CEPT1Q9Y6K0 416 aa12.75□□□□□ -0.37
CCDC12-210ENST00000604181 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 RBMY1BA6NDE4 496 aaKnown RBP12.74□□□□□ -0.37
CCDC12-210ENST00000604181 RBMY1EA6NEQ0 496 aaKnown RBP12.74□□□□□ -0.37
CCDC12-210ENST00000604181 SOCS1O15524 211 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 RBMY1DP0C7P1 496 aaKnown RBP12.74□□□□□ -0.37
CCDC12-210ENST00000604181 APELAP0DMC3 54 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 C1orf100Q5SVJ3 147 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 ZNF555Q8NEP9 628 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 C5orf30Q96GV9 206 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-210ENST00000604181 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
CCDC12-210ENST00000604181 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
CCDC12-210ENST00000604181 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms