RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 COX14Q96I36 57 aa8.37□□□□□ -1.07
CSMD1-217ENST00000602723 SLC25A10Q9UBX3 287 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-217ENST00000602723 RUNX1Q01196 453 aa8.37□□□□□ -1.07
CSMD1-217ENST00000602723 ROM1Q03395 351 aa8.37□□□□□ -1.07
CSMD1-217ENST00000602723 HDHD3Q9BSH5 251 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-217ENST00000602723 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
CSMD1-217ENST00000602723 GPR35Q9HC97 309 aa8.37□□□□□ -1.07
CSMD1-217ENST00000602723 TSPAN13O95857 204 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 VSIG10L2P0DP72 767 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 OR2Y1Q8NGV0 311 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 KCNK7Q9Y2U2 307 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CELA2BP08218 269 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 FOLR2P14207 255 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 RNF7Q9UBF6 113 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 DSPPQ9NZW4 1301 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CEACAM18A8MTB9 384 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 ARL14EPLP0DKL9 152 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 OTX1P32242 354 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 LEMD1Q68G75 181 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TMEM136Q6ZRR5 245 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 ZNF665Q9H7R5 613 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CSPG4Q6UVK1 2322 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 EMP1P54849 157 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 RPL31P62899 125 aaKnown RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 HERPUD1Q15011 391 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 MGAMO43451 1857 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 FOXC1Q12948 553 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 GMPPAQ96IJ6 420 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 GPA33Q99795 319 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TRAV39A0A0B4J263 110 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 VAX1Q5SQQ9 334 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TMEM222Q9H0R3 208 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 GREB1LQ9C091 1923 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 COL5A3P25940 1745 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 HRKO00198 91 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 REG1BP48304 166 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TEX30Q5JUR7 227 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 FAM53AQ6NSI3 398 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 CHRNA10Q9GZZ6 450 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
CSMD1-217ENST00000602723 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 C7orf66A4D0T2 115 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 ZIC1Q15915 447 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 RHBDD2Q6NTF9 364 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 RND1Q92730 232 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
CSMD1-217ENST00000602723 SOD3P08294 240 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 C1QTNF12Q5T7M4 302 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 OR8G5Q8NG78 346 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 MPDU1O75352 247 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 FCGR3AP08637 254 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 OR4A5Q8NH83 315 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 ABHD14BQ96IU4 210 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 TCFL5Q9UL49 500 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 ANAPC1Q9H1A4 1944 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 HSPB1P04792 205 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 TMEM45BQ96B21 275 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 OR5AC2Q9NZP5 309 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 MRPS18BQ9Y676 258 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 EML2O95834 649 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 MAGEA5P43359 124 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 ZNF273Q14593 569 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 NMBP08949 121 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 NUDT16L1Q9BRJ7 211 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 WFDC3Q8IUB2 231 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 DIRC2Q96SL1 478 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 LHX9Q9NQ69 397 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
CSMD1-217ENST00000602723 C1QL1O75973 258 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 HPRT1P00492 218 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 NEU1Q99519 415 aa8.35□□□□□ -1.07
CSMD1-217ENST00000602723 AGFG2O95081 481 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 DNAL4O96015 105 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 COL10A1Q03692 680 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 SCNM1Q9BWG6 230 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 HEXA-AS1Q9H8Q6 139 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 A0A0U1RQV5 110 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 HLA-DRB1P01911 266 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 BGLAPP02818 100 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 PRSS2P07478 247 aa8.34□□□□□ -1.07
CSMD1-217ENST00000602723 NPBWR2P48146 333 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms