RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	TRBV6-7	A0A0A0MS04	114 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	BET1	O15155	118 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	RRP9	O43818	475 aa	Known RBP	12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	CD33	P20138	364 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	DTYMK	P23919	212 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	MC5R	P33032	325 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	PNLIPRP3	Q17RR3	467 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	TEX38	Q6PEX7	206 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948		Q6ZS49	121 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	C18orf65	Q6ZTR6	163 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	GON7	Q9BXV9	100 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	ZNF221	Q9UK13	617 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	WASHC3	Q9Y3C0	194 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	TG	P01266	2768 aa		12.15	□□□□□ -0.46
PLD3-223	ENST00000600948	IGKV1D-8	A0A087WSZ0	117 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948		A0A087WXM4	84 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	IGHV7-81	A0A0B4J1V7	117 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	TNFAIP8	O95379	198 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	TALDO1	P37837	337 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	LINC00205	P59089	165 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	FOXE3	Q13461	319 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	RNF152	Q8N8N0	203 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	ZNF383	Q8NA42	475 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	TSPAN14	Q8NG11	270 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	OR10J5	Q8NHC4	309 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	RHBDL2	Q9NX52	303 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948	KIAA1456	Q9P272	454 aa		12.14	□□□□□ -0.47
PLD3-223	ENST00000600948		H7C2Y5	167 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	RRH	O14718	337 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	ATP6V0E1	O15342	81 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	RBBP9	O75884	186 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	SCGN	O76038	276 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	IGHG4	P01861	327 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	RPLP1	P05386	114 aa	Known RBP	12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	TFAP2A	P05549	437 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	ELANE	P08246	267 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	GSTP1	P09211	210 aa	Known RBP	12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	OR8U9	P0C7N5	309 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	IGLL1	P15814	213 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	VDAC1	P21796	283 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	SLC6A1	P30531	599 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	SCAND1	P57086	179 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	ZNF260	Q3ZCT1	412 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	CXorf66	Q5JRM2	361 aa	Predicted RBP	12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	HACD4	Q5VWC8	232 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	LCNL1	Q6ZST4	164 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	C8orf86	Q6ZUL3	223 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	LINC00482	Q8N8I6	264 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	KLHL30-AS1	Q8NEE0	82 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	OR5H6	Q8NGV6	325 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	OR8U1	Q8NH10	309 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	SLC25A38	Q96DW6	304 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	YIPF6	Q96EC8	236 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	OR2D2	Q9H210	308 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	OR51J1	Q9H342	316 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	FBXL15	Q9H469	300 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	GAB2	Q9UQC2	676 aa		12.13	□□□□□ -0.47
PLD3-223	ENST00000600948	TMEM235	A6NFC5	223 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	NUDT19	A8MXV4	375 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948		M0R1X1	148 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	OR5H8	P0DN80	308 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	PPIF	P30405	207 aa	Known RBP	12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	TGFBR1	P36897	503 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	THBS3	P49746	956 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	NDP	Q00604	133 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	TIMM50	Q3ZCQ8	353 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	IDNK	Q5T6J7	187 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	LIN54	Q6MZP7	749 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	ZNF695	Q8IW36	515 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	MRPL41	Q8IXM3	137 aa	Known RBP	12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	NUDCD2	Q8WVJ2	157 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	C5orf30	Q96GV9	206 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	RNF5	Q99942	180 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	GINS4	Q9BRT9	223 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	PARP11	Q9NR21	331 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	ETV7	Q9Y603	341 aa		12.12	□□□□□ -0.47
PLD3-223	ENST00000600948	TRIM64C	A6NLI5	447 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948		G3V318	75 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	SSX5	O60225	188 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	PRB2	P02812	416 aa	Predicted RBP	12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	IGKV1-16	P04430	117 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	PSMB8	P28062	276 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	PITPNA	Q00169	270 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	PDPN	Q86YL7	162 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	P2RX4	Q99571	388 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	DCSTAMP	Q9H295	470 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	VCX3A	Q9NNX9	186 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	SDHAF2	Q9NX18	166 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	FBXO7	Q9Y3I1	522 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	WSB1	Q9Y6I7	421 aa		12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	PRKDC	P78527	4128 aa	Known RBP	12.11	□□□□□ -0.47
PLD3-223	ENST00000600948	FCN1	O00602	326 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	AIRE	O43918	545 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	APOA2	P02652	100 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	MYCNOS	P40205	109 aa		12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	CDX1	P47902	265 aa	Predicted RBP	12.1	□□□□□ -0.47
PLD3-223	ENST00000600948	CRIP2	P52943	208 aa	Predicted RBP	12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms