RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 BRWD1-AS2P59051 145 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 C11orf53Q8IXP5 236 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 SSX3Q99909 188 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 GGACTQ9BVM4 153 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 ZFHX4Q86UP3 3567 aa16.97■□□□□ 0.31
SHKBP1-225ENST00000600733 LINC00205P59089 165 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 RPS16P62249 146 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 PNRC1Q12796 327 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 FIP1L1Q6UN15 594 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 MRGPRGQ86SM5 289 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 MRGPRDQ8TDS7 321 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 PINX1Q96BK5 328 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 COQ2Q96H96 371 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 SDF2L1Q9HCN8 221 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 ODAMA1E959 279 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 TMEM210A6NLX4 147 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 C17orf98A8MV24 154 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 CYB5R3P00387 301 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 P0C879 139 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 TPRX1Q8N7U7 411 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 LHX4Q969G2 390 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 PARD6GQ9BYG4 376 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 SLC39A9Q9NUM3 307 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 FZR1Q9UM11 496 aa16.96■□□□□ 0.31
SHKBP1-225ENST00000600733 ZNF737O75373 536 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 GABRA2P47869 451 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 EIF4EBP1Q13541 118 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 PLA2G2CQ5R387 149 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 PRAMEF6Q5VXH4 476 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 ACSM6Q6P461 480 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 TMEM178AQ8NBL3 297 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 EDARADDQ8WWZ3 215 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 ZDHHC16Q969W1 377 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 FAM210BQ96KR6 192 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 UFSP2Q9NUQ7 469 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 PCNX2A6NKB5 2137 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 LRRC30A6NM36 301 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 ACSF3Q4G176 576 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 CNEP1R1Q8N9A8 125 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 TRIB1Q96RU8 372 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 P2RX4Q99571 388 aa16.95■□□□□ 0.3
SHKBP1-225ENST00000600733 OOEPA6NGQ2 149 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 CLDN34H7C241 214 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 S100PP25815 95 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 SSTR5P35346 364 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 GFI1BQ5VTD9 330 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 C1orf87Q8N0U7 546 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 SLC25A22Q9H936 323 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 CLCF1Q9UBD9 225 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 METRNQ9UJH8 293 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 IGHV3-43A0A0B4J1X8 118 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 ZG16O60844 167 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 IGHV3-43DP0DP04 118 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 CD81P60033 236 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 MSMO1Q15800 293 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 SPINK9Q5DT21 86 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 WDR25Q64LD2 544 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 SLC35E4Q6ICL7 350 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 Q6ZT83 130 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 FAM214BQ7L5A3 538 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 ZBTB34Q8NCN2 500 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 NINJ1Q92982 152 aa16.94■□□□□ 0.3
SHKBP1-225ENST00000600733 TRAV20A0A0B4J274 112 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 PTBP3O95758 552 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 TNFSF10P50591 281 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 RND2P52198 227 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 SOX8P57073 446 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 PDZD11Q5EBL8 140 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 PYY3Q5JQD4 70 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 INO80CQ6PI98 192 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 ACP7Q6ZNF0 438 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 TMEM242Q9NWH2 141 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 OR5H1A6NKK0 313 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 IFNA1P01562 189 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 IGHV2-70P01814 119 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 CATR1Q13166 79 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 RFESDQ8TAC1 157 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 ABHD5Q8WTS1 349 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 FRZBQ92765 325 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 MSL2Q9HCI7 577 aa16.93■□□□□ 0.3
SHKBP1-225ENST00000600733 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 MEF2BQ02080 365 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 C4orf17Q53FE4 359 aa16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 WDR82Q6UXN9 313 aa16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 SMIM7Q9BQ49 75 aa16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 GAR1Q9NY12 217 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 TIMM9Q9Y5J7 89 aa16.92■□□□□ 0.3
SHKBP1-225ENST00000600733 PMS2P5A8MQ11 134 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 SOD3P08294 240 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 TRGC1P0CF51 173 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 S100A2P29034 98 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 TFF3Q07654 80 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 CDPF1Q6NVV7 123 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 VWA1Q6PCB0 445 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 OR13A1Q8NGR1 328 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 OR13D1Q8NGV5 346 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 DTD1Q8TEA8 209 aa16.91■□□□□ 0.3
SHKBP1-225ENST00000600733 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms