RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 RNF5Q99942 180 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
SMG9-210ENST00000600097 RYR2Q92736 4967 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 FCN1O00602 326 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 TFAP2AP05549 437 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 GSTP1P09211 210 aaKnown RBP13.21□□□□□ -0.29
SMG9-210ENST00000600097 HSMCR30P0CW71 290 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 TPPP2P59282 170 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 TBCEQ15813 527 aaPredicted RBP13.21□□□□□ -0.29
SMG9-210ENST00000600097 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 SGPP2Q8IWX5 399 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 SVOPQ8N4V2 548 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 IL1F10Q8WWZ1 152 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 UFD1Q92890 307 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 FAM46BQ96A09 425 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 RHOVQ96L33 236 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 DERL3Q96Q80 235 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 SLC23A1Q9UHI7 598 aa13.21□□□□□ -0.29
SMG9-210ENST00000600097 ST8SIA5O15466 376 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 UBBP0CG47 229 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 CT45A6P0DMU7 189 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 CT45A5P0DMU8 189 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 CT45A7P0DMV0 189 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 VEGFCP49767 419 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
SMG9-210ENST00000600097 TRAM1Q15629 374 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 ZNF562Q6V9R5 426 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 Q8N1Y9 231 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 MS4A10Q96PG2 267 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 WASHC3Q9Y3C0 194 aa13.2□□□□□ -0.3
SMG9-210ENST00000600097 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
SMG9-210ENST00000600097 DNAH7Q8WXX0 4024 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 H0YJW9 148 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 H7C2Y5 167 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 ZP3P21754 424 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 TPBGQ13641 420 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 RPL39P5Q59GN2 51 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 ZNF367Q7RTV3 350 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 LFNGQ8NES3 379 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 OR5AN1Q8NGI8 311 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 MGLLQ99685 303 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 SULT4A1Q9BR01 284 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 FAM103A1Q9BTL3 118 aaKnown RBP13.19□□□□□ -0.3
SMG9-210ENST00000600097 RSRP1Q9BUV0 290 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 GAB2Q9UQC2 676 aa13.19□□□□□ -0.3
SMG9-210ENST00000600097 ITGB1BP1O14713 200 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 TRGV3P03979 118 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 CPEP16870 476 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 PSMA1P25786 263 aaKnown RBP13.18□□□□□ -0.3
SMG9-210ENST00000600097 MAP2K4P45985 399 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 LIPKQ5VXJ0 399 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
SMG9-210ENST00000600097 MOB1BQ7L9L4 216 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 FAAP24Q9BTP7 215 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 TMED9Q9BVK6 235 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 RANGRFQ9HD47 186 aaPredicted RBP13.18□□□□□ -0.3
SMG9-210ENST00000600097 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
SMG9-210ENST00000600097 METTL1Q9UBP6 276 aaKnown RBP13.18□□□□□ -0.3
SMG9-210ENST00000600097 SLC22A1O15245 554 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 SPDEFO95238 335 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 NAPSAO96009 420 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
SMG9-210ENST00000600097 PSG5Q15238 335 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 MOGAT2Q3SYC2 334 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 ACSM3Q53FZ2 586 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 C6orf201Q7Z4U5 140 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 HAPLN4Q86UW8 402 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 CLCC1Q96S66 551 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 TSNAXQ99598 290 aaKnown RBP13.17□□□□□ -0.3
SMG9-210ENST00000600097 AGMATQ9BSE5 352 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 TMEM59Q9BXS4 323 aa13.17□□□□□ -0.3
SMG9-210ENST00000600097 CHMP1AQ9HD42 196 aaPredicted RBP13.17□□□□□ -0.3
SMG9-210ENST00000600097 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 H0Y980 276 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 H3BUA1 57 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 CA2P00918 260 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 ARSBP15848 533 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 ZNF880Q6PDB4 577 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 KCNG3Q8TAE7 436 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 ABHD14BQ96IU4 210 aa13.16□□□□□ -0.3
SMG9-210ENST00000600097 RIMS4Q9H426 269 aaPredicted RBP13.16□□□□□ -0.3
SMG9-210ENST00000600097 C13orf42A0A1B0GVH6 325 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 IFNA6P05013 189 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 ZBTB25P24278 435 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 KCTD21Q4G0X4 260 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 CEACAM19Q7Z692 300 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 POC5Q8NA72 575 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 SETD6Q8TBK2 473 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 PHYHIPQ92561 330 aa13.15□□□□□ -0.3
SMG9-210ENST00000600097 TM2D1Q9BX74 207 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms