RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 MINDY2Q8NBR6 621 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 MYOZ3Q8TDC0 251 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 MAFIPQ8WZ33 124 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 GALMQ96C23 342 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 OR5B12Q96R08 314 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 GON7Q9BXV9 100 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 C11orf54Q9H0W9 315 aaPredicted RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 ALX4Q9H161 411 aaPredicted RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 FBXL15Q9H469 300 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 Q9N2K0 584 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 TPSG1Q9NRR2 321 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 ZFP57Q9NU63 452 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 PLEKHJ1Q9NW61 149 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 SLC23A1Q9UHI7 598 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 ELF5Q9UKW6 265 aaPredicted RBP8.31□□□□□ -1.08
VRK3-214ENST00000598553 RNF150Q9ULK6 438 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 A3GALT2U3KPV4 340 aa8.31□□□□□ -1.08
VRK3-214ENST00000598553 IGKV1D-8A0A087WSZ0 117 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 CCL24O00175 119 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 NBR2O15453 112 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 RGS11O94810 467 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 NDUFA3O95167 84 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 EGR2P11161 476 aaPredicted RBP8.3□□□□□ -1.08
VRK3-214ENST00000598553 ARSBP15848 533 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 CD36P16671 472 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 MYCNOSP40205 109 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 RAB25P57735 213 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 GNB1P62873 340 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 SSBP2P81877 361 aaPredicted RBP8.3□□□□□ -1.08
VRK3-214ENST00000598553 TRAM1Q15629 374 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 RAB11BQ15907 218 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 PNLIPRP3Q17RR3 467 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 RGS21Q2M5E4 152 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 TEX38Q6PEX7 206 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 MOB1BQ7L9L4 216 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 OR2AK2Q8NG84 335 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 FAM3DQ96BQ1 224 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 FAM103A1Q9BTL3 118 aaKnown RBP8.3□□□□□ -1.08
VRK3-214ENST00000598553 GPR61Q9BZJ8 451 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 CHMP1AQ9HD42 196 aaPredicted RBP8.3□□□□□ -1.08
VRK3-214ENST00000598553 ISYNA1Q9NPH2 558 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 PARP11Q9NR21 331 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 ABRACLQ9P1F3 81 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 ZNF580Q9UK33 172 aa8.3□□□□□ -1.08
VRK3-214ENST00000598553 TRBV6-6A0A0A6YYG2 114 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 H0YJW9 148 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 ARL6IP5O75915 188 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 IGHG4P01861 327 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 HLA-DRB1P01911 266 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 IGF1P05019 195 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 PSMA1P25786 263 aaKnown RBP8.29□□□□□ -1.08
VRK3-214ENST00000598553 FOXE3Q13461 319 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 C5orf64Q2M2E5 130 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 CXorf66Q5JRM2 361 aaPredicted RBP8.29□□□□□ -1.08
VRK3-214ENST00000598553 FAM71F2Q6NXP2 309 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 ZNF383Q8NA42 475 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 NPBQ8NG41 125 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 DYNC2LI1Q8TCX1 351 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 OR51J1Q9H342 316 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 ZNF230Q9UIE0 474 aaPredicted RBP8.29□□□□□ -1.08
VRK3-214ENST00000598553 V9GY05 133 aa8.29□□□□□ -1.08
VRK3-214ENST00000598553 RAB27BO00194 218 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 MFNGO00587 321 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 AIREO43918 545 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 IGLV1-40P01703 118 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 IGKV1-16P04430 117 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 ELANEP08246 267 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 GNB3P16520 340 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 VDAC1P21796 283 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 CDX1P47902 265 aaPredicted RBP8.28□□□□□ -1.08
VRK3-214ENST00000598553 DEFA5Q01523 94 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 FHL3Q13643 280 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 IGSF11Q5DX21 431 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 OR6Q1Q8NGQ2 317 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 PRR25Q96S07 402 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 CMSS1Q9BQ75 279 aaKnown RBP8.28□□□□□ -1.08
VRK3-214ENST00000598553 URM1Q9BTM9 101 aaKnown RBP8.28□□□□□ -1.08
VRK3-214ENST00000598553 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
VRK3-214ENST00000598553 NDUFB11Q9NX14 153 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 CCDC59Q9P031 241 aaKnown RBP8.28□□□□□ -1.08
VRK3-214ENST00000598553 HSF4Q9ULV5 492 aa8.28□□□□□ -1.08
VRK3-214ENST00000598553 TNCP24821 2201 aa8.27□□□□□ -1.08
VRK3-214ENST00000598553 A0A075B6Q4 140 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 RRHO14718 337 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 ARPC1BO15143 372 aaKnown RBP8.27□□□□□ -1.09
VRK3-214ENST00000598553 FCGR3AP08637 254 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 GSTT2P0CG29 244 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 GSTT2BP0CG30 244 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 OR5H8P0DN80 308 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 CEACAM6P40199 344 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 VBP1P61758 197 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 KIR2DS1Q14954 304 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 C22orf42Q6IC83 251 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 CD200R1LQ6Q8B3 271 aa8.27□□□□□ -1.09
VRK3-214ENST00000598553 ZNF491Q8N8L2 437 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms