RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SLC22A5O76082 557 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 PPYP01298 95 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 SNRNP70P08621 437 aaKnown RBP11.53□□□□□ -0.56
VRK3-213ENST00000597215 AADACP22760 399 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 CD1BP29016 333 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 TAS2R19P59542 299 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
VRK3-213ENST00000597215 HERV-K104P61576 105 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 LSAMPQ13449 338 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 ZNF79Q15937 498 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
VRK3-213ENST00000597215 NABP2Q9BQ15 211 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 TAS2R8Q9NYW2 309 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 IGHV3-72A0A0B4J1Y9 119 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 J3QRK9 145 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 M0R1X1 148 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 CD3DP04234 171 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 CRYBA1P05813 215 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 CSF1P09603 554 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 CD24P25063 80 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 TSPAN5P62079 268 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 HES1Q14469 280 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 VAX1Q5SQQ9 334 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 DHRS11Q6UWP2 260 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 LINC00299Q6ZSB3 139 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 TMEM219Q86XT9 240 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 Q8N402 240 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 ZNF645Q8N7E2 425 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 OR6F1Q8NGZ6 308 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 ZNF2Q9BSG1 426 aaPredicted RBP11.52□□□□□ -0.57
VRK3-213ENST00000597215 SDHAF2Q9NX18 166 aa11.52□□□□□ -0.57
VRK3-213ENST00000597215 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 M0QYG6 137 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 CD74P04233 296 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 IFNA6P05013 189 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 TMEM11P17152 192 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 FXYD4P59646 89 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
VRK3-213ENST00000597215 DHRS7BQ6IAN0 325 aaPredicted RBP11.51□□□□□ -0.57
VRK3-213ENST00000597215 STEAP1BQ6NZ63 245 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 CCBE1Q6UXH8 406 aaPredicted RBP11.51□□□□□ -0.57
VRK3-213ENST00000597215 TMEM17Q86X19 198 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 SECTM1Q8WVN6 248 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
VRK3-213ENST00000597215 THAP7Q9BT49 309 aaPredicted RBP11.51□□□□□ -0.57
VRK3-213ENST00000597215 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 OR5H14A6NHG9 310 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 PROP1O75360 226 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 RAB3DO95716 219 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 MC5RP33032 325 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 ZNF45Q02386 682 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 EBI3Q14213 229 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 MEF2DQ14814 521 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 MSMO1Q15800 293 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 KRTAP24-1Q3LI83 254 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 ARRDC1Q8N5I2 433 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
VRK3-213ENST00000597215 GDPD1Q8N9F7 314 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
VRK3-213ENST00000597215 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 MOB3AQ96BX8 217 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 ADTRPQ96IZ2 230 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 RBM14Q96PK6 669 aaKnown RBP11.5□□□□□ -0.57
VRK3-213ENST00000597215 SLC25A33Q9BSK2 321 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 TINAGL1Q9GZM7 467 aaPredicted RBP11.5□□□□□ -0.57
VRK3-213ENST00000597215 SRRQ9GZT4 340 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 SLC5A7Q9GZV3 580 aa11.5□□□□□ -0.57
VRK3-213ENST00000597215 H0YJW9 148 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 CHST1O43916 411 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 OR2F2O95006 317 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 MOSP00540 346 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 APOA2P02652 100 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 THBS3P49746 956 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
VRK3-213ENST00000597215 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 OR5AN1Q8NGI8 311 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 BORCS5Q969J3 196 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 TRIM63Q969Q1 353 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
VRK3-213ENST00000597215 FXYD6Q9H0Q3 95 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 WASHC3Q9Y3C0 194 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 ATRQ13535 2644 aa11.49□□□□□ -0.57
VRK3-213ENST00000597215 H7C2Y5 167 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 IGLV2-14P01704 120 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 AMY2AP04746 511 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 AP3S2P59780 193 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 TAGLNQ01995 201 aaKnown RBP11.48□□□□□ -0.57
VRK3-213ENST00000597215 HNF4GQ14541 408 aa11.48□□□□□ -0.57
VRK3-213ENST00000597215 KRTAP21-3Q3LHN1 58 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms