RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 S100GP29377 79 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 ZNF137PP52743 207 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 DLX1P56177 255 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 PAX8Q06710 450 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 RPL39P5Q59GN2 51 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 C11orf88Q6PI97 169 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 OR11H6Q8NGC7 330 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 CASTOR1Q8WTX7 329 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 GLYATL2Q8WU03 294 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 TP53RKQ96S44 253 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 FOXC2Q99958 501 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 CLEC7AQ9BXN2 247 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 PIPOXQ9P0Z9 390 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 ZNRD1Q9P1U0 126 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 KCNIP3Q9Y2W7 256 aa12.01□□□□□ -0.49
SHKBP1-211ENST00000595945 DBX1A6NMT0 343 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 H0Y980 276 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 SSNA1O43805 119 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 B3GALNT1O75752 331 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 MSMBP08118 114 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 UCP1P25874 307 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
SHKBP1-211ENST00000595945 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
SHKBP1-211ENST00000595945 C2orf68Q2NKX9 166 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 ZNF833PQ6ZTB9 187 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 LYG1Q8N1E2 194 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 LRTM2Q8N967 370 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 ST6GALNAC6Q969X2 333 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 MSI2Q96DH6 328 aaKnown RBP12□□□□□ -0.49
SHKBP1-211ENST00000595945 Q96MF0 132 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 TBX15Q96SF7 602 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
SHKBP1-211ENST00000595945 NEURL2Q9BR09 285 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 TMEM222Q9H0R3 208 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
SHKBP1-211ENST00000595945 TEX15Q9BXT5 2789 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 LINC00473A8K010 186 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 B4DSR2 109 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 RNF223E7ERA6 249 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 ANXA3P12429 323 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 HLA-GP17693 338 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 PRRX1P54821 245 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 BRWD1-AS2P59051 145 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 HLA-DRB5Q30154 266 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 SP6Q3SY56 376 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 LIAT1Q6ZQX7 453 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 PNKDQ8N490 385 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 OR11H7Q8NGC8 314 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 OR13D1Q8NGV5 346 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 COQ8AQ8NI60 647 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 TMEM56Q96MV1 263 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 PHB2Q99623 299 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 HEXA-AS1Q9H8Q6 139 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 LPAR2Q9HBW0 351 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 FAM212BQ9NTI7 297 aaPredicted RBP11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 PRR13Q9NZ81 148 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 TMEM56-RWDD3S4R434 201 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 ACANP16112 2415 aa11.99□□□□□ -0.49
SHKBP1-211ENST00000595945 RNASEK-C17orf49H0YIS7 233 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 LY6LH3BQJ8 138 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 M0R1X1 148 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 CDS2O95674 445 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 CXCL3P19876 107 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 COX7A1P24310 79 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 SRPXP78539 464 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 CATR1Q13166 79 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 KLRD1Q13241 179 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 ZNF585BQ52M93 769 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 LIN54Q6MZP7 749 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 TCTEX1D1Q8N7M0 179 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 LINC01356Q8N9X3 169 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 OR51H1Q8NH63 302 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 LHFPL5Q8TAF8 219 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 DDB2Q92466 427 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 TMEM186Q96B77 213 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 S1PR3Q99500 378 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 LIN7CQ9NUP9 197 aaKnown RBP11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
SHKBP1-211ENST00000595945 TNCP24821 2201 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 TRAV20A0A0B4J274 112 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 TOR1AO14656 332 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 TOX4O94842 621 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 THBS3P49746 956 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 LINC00205P59089 165 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 LGI3Q8N145 548 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 WFDC11Q8NEX6 87 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 OR10X1Q8NGY0 326 aa11.97□□□□□ -0.49
SHKBP1-211ENST00000595945 IL22RA2Q969J5 263 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms