RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CER1O95813 267 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 CFIP05156 583 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 RAB4BP61018 213 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 ERVS71-1P61550 626 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 GNB2P62879 340 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 SRYQ05066 204 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 GABRA6Q16445 453 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 FFAR4Q5NUL3 377 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 MED12LQ86YW9 2145 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 TMEM30CPA0ZSE6 113 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 ODAMA1E959 279 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 TMPRSS2O15393 492 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 MLNRO43193 412 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 CLDN14O95500 239 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 IDH3GP51553 393 aaPredicted RBP11.14□□□□□ -0.63
VRK3-209ENST00000594948 SLC35E4Q6ICL7 350 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 FIP1L1Q6UN15 594 aaKnown RBP11.14□□□□□ -0.63
VRK3-209ENST00000594948 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 WDR31Q8NA23 367 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 BCL2L2Q92843 193 aaPredicted RBP11.14□□□□□ -0.63
VRK3-209ENST00000594948 RAB1CQ92928 201 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 TAAR6Q96RI8 345 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 PCGF1Q9BSM1 259 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
VRK3-209ENST00000594948 USP34Q70CQ2 3546 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 TMEM210A6NLX4 147 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 ST8SIA5O15466 376 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 ZNHIT1O43257 154 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 PDE6DO43924 150 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 WISP2O76076 250 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 RAC2P15153 192 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 TUBG1P23258 451 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 IGFBP7Q16270 282 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 SPINK14Q6IE38 97 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 FAM180AQ6UWF9 173 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 NUFIP2Q7Z417 695 aaKnown RBP11.13□□□□□ -0.63
VRK3-209ENST00000594948 ZNF664Q8N3J9 261 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 NECAP1Q8NC96 275 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 DTD1Q8TEA8 209 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 THOC3Q96J01 351 aaKnown RBP11.13□□□□□ -0.63
VRK3-209ENST00000594948 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 HES4Q9HCC6 221 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 ABI3Q9P2A4 366 aa11.13□□□□□ -0.63
VRK3-209ENST00000594948 TRAV39A0A0B4J263 110 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 OOEPA6NGQ2 149 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
VRK3-209ENST00000594948 F6UZH7 168 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 MT-CO3P00414 261 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 CELA3AP09093 270 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 FOSL1P15407 271 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 P2RY6Q15077 328 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 GALMQ96C23 342 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 TTTY12Q9BZ98 90 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 CNTRLQ7Z7A1 2325 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 PTPRBP23467 1997 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 PAGE4O60829 102 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 NXPH2O95156 264 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
VRK3-209ENST00000594948 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 TIPARPQ7Z3E1 657 aaKnown RBP11.12□□□□□ -0.63
VRK3-209ENST00000594948 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 KCNIP2Q9NS61 270 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 CLN8Q9UBY8 286 aa11.12□□□□□ -0.63
VRK3-209ENST00000594948 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 MPDU1O75352 247 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 IL18BPO95998 194 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 HAND1O96004 215 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 SELEP16581 610 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 G6PCP35575 357 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
VRK3-209ENST00000594948 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
VRK3-209ENST00000594948 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
VRK3-209ENST00000594948 TFF3Q07654 80 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 FOXL1Q12952 345 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 MRPL49Q13405 166 aaKnown RBP11.11□□□□□ -0.63
VRK3-209ENST00000594948 SLC10A1Q14973 349 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 AARDQ4LEZ3 155 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 MDP1Q86V88 176 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 TMEM251Q8N6I4 163 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 FUT9Q9Y231 359 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
VRK3-209ENST00000594948 FAM90A9PA6NNJ1 464 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 IQCF6A8MYZ5 107 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 C11orf94C9JXX5 98 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 ZG16O60844 167 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 RAMP3O60896 148 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 S1PR2O95136 353 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 KRASP01116 189 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms