RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CD36P16671 472 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 RPL39P5Q59GN2 51 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 RNF152Q8N8N0 203 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 PARP12Q9H0J9 701 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 DAPK2Q9UIK4 370 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 LINC00527Q9UJ94 153 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 A0A0B4J203 849 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 IGKV1-6A0A0C4DH72 117 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 H0YJW9 148 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 SPDEFO95238 335 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 IGHG4P01861 327 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 TFAP2AP05549 437 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 CT45A6P0DMU7 189 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 CT45A5P0DMU8 189 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 CT45A7P0DMV0 189 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 TAGLNQ01995 201 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 LIN54Q6MZP7 749 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 PDPNQ86YL7 162 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 KLHL30-AS1Q8NEE0 82 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 HSPB9Q9BQS6 159 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 GINS4Q9BRT9 223 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 OR51E2Q9H255 320 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 OR51J1Q9H342 316 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 GAB2Q9UQC2 676 aa13.95□□□□□ -0.18
SHKBP1-204ENST00000594862 A0A087WXM4 84 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 LOC100506127A0A0U1RQW1 187 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 LINC01548A6NM66 108 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 BET1O15155 118 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 SDC2P34741 201 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 MYCNOSP40205 109 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 CFHR3Q02985 330 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 PLGLAQ15195 96 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 HACD4Q5VWC8 232 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 TSNAXQ99598 290 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 MCRIP2Q9BUT9 160 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 DCSTAMPQ9H295 470 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 NECAP2Q9NVZ3 263 aa13.94□□□□□ -0.18
SHKBP1-204ENST00000594862 A0A0A6YYH2 397 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 A6NJ64 397 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 RRHO14718 337 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 CTXN2P0C2S0 81 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 CBX3Q13185 183 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 ZNF660Q6AZW8 331 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 OR8U1Q8NH10 309 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 LGALS14Q8TCE9 139 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 DPF1Q92782 380 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 PARP11Q9NR21 331 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 RHBDL2Q9NX52 303 aa13.93□□□□□ -0.18
SHKBP1-204ENST00000594862 GSTT2P0CG29 244 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 GSTT2BP0CG30 244 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 CDX1P47902 265 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 THBS3P49746 956 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 GNG2P59768 71 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 MXD1Q05195 221 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 CDNFQ49AH0 187 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 OXLD1Q5BKU9 147 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 IGSF11Q5DX21 431 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 LINC00482Q8N8I6 264 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 TSPAN14Q8NG11 270 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 OR2D2Q9H210 308 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 RBM7Q9Y580 266 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-204ENST00000594862 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 TRAV41A0A0B4J266 112 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 M0R1X1 148 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 ATP6V0E1O15342 81 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 OR8U9P0C7N5 309 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 SNRPBP14678 240 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 CNTFRP26992 372 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 PSMB8P28062 276 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 TMEM65Q6PI78 240 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 GLDNQ6ZMI3 551 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 C8orf86Q6ZUL3 223 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 MRPL41Q8IXM3 137 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 ADTRPQ96IZ2 230 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 RITA1Q96K30 269 aa13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 ZNF230Q9UIE0 474 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-204ENST00000594862 RPLP1P05386 114 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 RRASP10301 218 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 IGLL1P15814 213 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 CRIP2P52943 208 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 IDNKQ5T6J7 187 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 ETV3LQ6ZN32 361 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 H1FOOQ8IZA3 346 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 ZNF383Q8NA42 475 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 MAFIPQ8WZ33 124 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 FLYWCH2Q96CP2 140 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 P2RX4Q99571 388 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 FBXL15Q9H469 300 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 SLC35D1Q9NTN3 355 aa13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 ZMAT5Q9UDW3 170 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-204ENST00000594862 AIREO43918 545 aa13.89□□□□□ -0.19
SHKBP1-204ENST00000594862 PROP1O75360 226 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms