RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SLC35G3Q8N808 338 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 LY6G5BQ8NDX9 201 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 CT45A3Q8NHU0 189 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 FAM168AQ92567 244 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 IL22RA2Q969J5 263 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 MARVELD3Q96A59 401 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 PERPQ96FX8 193 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 ABHD14AQ9BUJ0 271 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.42
VRK3-207ENST00000594092 A0A1W2PPE3 182 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 TSC22D2O75157 780 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 PET100P0DJ07 73 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 CXCL2P19875 107 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 EIF4EBP1Q13541 118 aaPredicted RBP12.45□□□□□ -0.42
VRK3-207ENST00000594092 TMEM65Q6PI78 240 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 ZNF546Q86UE3 836 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
VRK3-207ENST00000594092 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 SDHAF2Q9NX18 166 aa12.45□□□□□ -0.42
VRK3-207ENST00000594092 SERPINE2P07093 398 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 RPA2P15927 270 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 GPR12P47775 334 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 GNG10P50151 68 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 RAB7AP51149 207 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 LMO4P61968 165 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 CLEC2AQ6UVW9 174 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 RBPMSQ93062 196 aaKnown RBP12.44□□□□□ -0.42
VRK3-207ENST00000594092 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 MBD2Q9UBB5 411 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
VRK3-207ENST00000594092 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 A0A1W2PPH5 198 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 NDUFS8O00217 210 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 RGS13O14921 159 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
VRK3-207ENST00000594092 CATR1Q13166 79 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 IL15RAQ13261 267 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 Q3ZCU0 254 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 HIST2H2BCQ6DN03 193 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 SLC25A48Q6ZT89 311 aaKnown RBP12.44□□□□□ -0.42
VRK3-207ENST00000594092 RAB39BQ96DA2 213 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
VRK3-207ENST00000594092 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
VRK3-207ENST00000594092 KIAA1324LA8MWY0 1029 aaPredicted RBP12.43□□□□□ -0.42
VRK3-207ENST00000594092 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 PROP1O75360 226 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 LIPFP07098 398 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 ZFP36P26651 326 aaKnown RBP12.43□□□□□ -0.42
VRK3-207ENST00000594092 S100A10P60903 97 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 RAB32Q13637 225 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 TNFSF18Q9UNG2 199 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 SESN1Q9Y6P5 492 aa12.43□□□□□ -0.42
VRK3-207ENST00000594092 ARHGAP32A7KAX9 2087 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 RBP4P02753 201 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 VDAC1P21796 283 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 S100A11P31949 105 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 RPL30P62888 115 aaKnown RBP12.42□□□□□ -0.42
VRK3-207ENST00000594092 OPCMLQ14982 345 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 PRSS54Q6PEW0 395 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 DCUN1D4Q92564 292 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 GAB2Q9UQC2 676 aa12.42□□□□□ -0.42
VRK3-207ENST00000594092 A0A087X0M5 115 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 A0A1B0GX30 115 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 RPL39P5Q59GN2 51 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 C1orf229Q6ZS94 237 aaPredicted RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ZFP57Q9NU63 452 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ZNRD1Q9P1U0 126 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ONECUT1Q9UBC0 465 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 POLQO75417 2590 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 IGHV4-30-2A0A087WSY4 118 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 A0A0D9SG52 128 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 A8MXK9 166 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 RAB29O14966 203 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 OR2F2O95006 317 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 SCGB1D2O95969 90 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 RLN2P04090 185 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 LYL1P12980 280 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 AP2S1P53680 142 aaPredicted RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 OR2F1Q13607 317 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ZNF345Q14585 488 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 THOC7Q6I9Y2 204 aaKnown RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 LYG1Q8N1E2 194 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 C8orf31Q8N9H6 132 aa12.41□□□□□ -0.42
VRK3-207ENST00000594092 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
VRK3-207ENST00000594092 RNF126Q9BV68 326 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms