RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 BEAN1Q3B7T3 259 aa21.41■■□□□ 1.02
SMAD4-213ENST00000591914 PDLIM3Q53GG5 364 aaPredicted RBP21.41■■□□□ 1.02
SMAD4-213ENST00000591914 KPRPQ5T749 579 aaPredicted RBP21.41■■□□□ 1.02
SMAD4-213ENST00000591914 GLDNQ6ZMI3 551 aaPredicted RBP21.41■■□□□ 1.02
SMAD4-213ENST00000591914 WFDC9Q8NEX5 89 aa21.41■■□□□ 1.02
SMAD4-213ENST00000591914 OR10J5Q8NHC4 309 aa21.41■■□□□ 1.02
SMAD4-213ENST00000591914 ZNF221Q9UK13 617 aa21.41■■□□□ 1.02
SMAD4-213ENST00000591914 NOTCH3Q9UM47 2321 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 HLA-DRB1P01911 266 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 CFHR3Q02985 330 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 PNLIPRP3Q17RR3 467 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 C5orf64Q2M2E5 130 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 TIMM50Q3ZCQ8 353 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 HACD4Q5VWC8 232 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 TEX38Q6PEX7 206 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 ZFP57Q9NU63 452 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 RHBDL2Q9NX52 303 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 WASHC3Q9Y3C0 194 aa21.4■■□□□ 1.02
SMAD4-213ENST00000591914 GSTP1P09211 210 aaKnown RBP21.39■■□□□ 1.01
SMAD4-213ENST00000591914 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.39■■□□□ 1.01
SMAD4-213ENST00000591914 VCX3AQ9NNX9 186 aa21.39■■□□□ 1.01
SMAD4-213ENST00000591914 ETV7Q9Y603 341 aa21.39■■□□□ 1.01
SMAD4-213ENST00000591914 IGKV1D-8A0A087WSZ0 117 aa21.38■■□□□ 1.01
SMAD4-213ENST00000591914 RBBP9O75884 186 aa21.38■■□□□ 1.01
SMAD4-213ENST00000591914 PF4P02776 101 aa21.38■■□□□ 1.01
SMAD4-213ENST00000591914 DRAXINQ8NBI3 349 aaPredicted RBP21.38■■□□□ 1.01
SMAD4-213ENST00000591914 YIPF6Q96EC8 236 aa21.38■■□□□ 1.01
SMAD4-213ENST00000591914 KIAA1456Q9P272 454 aa21.38■■□□□ 1.01
SMAD4-213ENST00000591914 SLC6A1P30531 599 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 FOXE3Q13461 319 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 ZNF260Q3ZCT1 412 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 OXLD1Q5BKU9 147 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 IDNKQ5T6J7 187 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 LIN54Q6MZP7 749 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 RNF152Q8N8N0 203 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 ZNF383Q8NA42 475 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 OR5H6Q8NGV6 325 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 SLC25A38Q96DW6 304 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 GAB2Q9UQC2 676 aa21.37■■□□□ 1.01
SMAD4-213ENST00000591914 IGHV7-81A0A0B4J1V7 117 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 TMEM235A6NFC5 223 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 TRIM64CA6NLI5 447 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 H7C2Y5 167 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 TMEM127O75204 238 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 IGHG4P01861 327 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 TFAP2AP05549 437 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 OR8U9P0C7N5 309 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 CD33P20138 364 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 VDAC1P21796 283 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 PITPNAQ00169 270 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 ETV3LQ6ZN32 361 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 OR8U1Q8NH10 309 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 RNF5Q99942 180 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 OR2D2Q9H210 308 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 DCSTAMPQ9H295 470 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 OR51J1Q9H342 316 aa21.36■■□□□ 1.01
SMAD4-213ENST00000591914 PRKDCP78527 4128 aaKnown RBP21.36■■□□□ 1.01
SMAD4-213ENST00000591914 RRHO14718 337 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 AIREO43918 545 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 ELANEP08246 267 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 OR5H8P0DN80 308 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 LINC00205P59089 165 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 C18orf65Q6ZTR6 163 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 NUDCD2Q8WVJ2 157 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 GINS4Q9BRT9 223 aa21.35■■□□□ 1.01
SMAD4-213ENST00000591914 M0R1X1 148 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 IGKV1-16P04430 117 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 RPLP1P05386 114 aaKnown RBP21.34■■□□□ 1.01
SMAD4-213ENST00000591914 TGFBR1P36897 503 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 H1FOOQ8IZA3 346 aaPredicted RBP21.34■■□□□ 1.01
SMAD4-213ENST00000591914 ST6GALNAC5Q9BVH7 336 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 FBXL15Q9H469 300 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 SDHAF2Q9NX18 166 aa21.34■■□□□ 1.01
SMAD4-213ENST00000591914 ATP6V0E1O15342 81 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 SSX5O60225 188 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 CXorf66Q5JRM2 361 aaPredicted RBP21.33■■□□□ 1.01
SMAD4-213ENST00000591914 C8orf86Q6ZUL3 223 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 PDPNQ86YL7 162 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 ZNF695Q8IW36 515 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 KLHL30-AS1Q8NEE0 82 aa21.33■■□□□ 1.01
SMAD4-213ENST00000591914 A0A0A6YYH2 397 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 A6NJ64 397 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 NUDT19A8MXV4 375 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 APOA2P02652 100 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 PSMB8P28062 276 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 PPIFP30405 207 aaKnown RBP21.32■■□□□ 1
SMAD4-213ENST00000591914 THBS3P49746 956 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 GNG2P59768 71 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 LCNL1Q6ZST4 164 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 CROCCP3Q8IVE0 287 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 LINC00482Q8N8I6 264 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 C5orf30Q96GV9 206 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 PARP11Q9NR21 331 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 SPATA2Q9UM82 520 aa21.32■■□□□ 1
SMAD4-213ENST00000591914 IGLL1P15814 213 aa21.31■■□□□ 1
SMAD4-213ENST00000591914 WSB1Q9Y6I7 421 aa21.31■■□□□ 1
SMAD4-213ENST00000591914 G3V318 75 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 SPDEFO95238 335 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 CTXN2P0C2S0 81 aa21.3■■□□□ 1
SMAD4-213ENST00000591914 RPS19P39019 145 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms